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Protein
Submitted name:

Nucleoporin 98

Gene

NUP98

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Nucleoporin 98Imported
Gene namesi
Name:NUP98Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000000661.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini691 – 833Peptidase S59InterPro annotationAdd BLAST143

Phylogenomic databases

eggNOGiKOG0845. Eukaryota.
ENOG410XPV4. LUCA.
GeneTreeiENSGT00550000074799.
InParanoidiI3LX94.
OMAiMETPESW.
OrthoDBiEOG091G00HN.
TreeFamiTF343335.

Family and domain databases

Gene3Di3.30.1610.10. 1 hit.
InterProiView protein in InterPro
IPR021967. Nup96.
IPR007230. Peptidase_S59.
IPR036903. Peptidase_S59_sf.
PfamiView protein in Pfam
PF04096. Nucleoporin2. 1 hit.
PF12110. Nup96. 1 hit.
SUPFAMiSSF82215. SSF82215. 1 hit.
PROSITEiView protein in PROSITE
PS51434. NUP_C. 1 hit.

Sequencei

Sequence statusi: Complete.

I3LX94-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFNKSFGTPF GGSTGGFGTT STFGQNTGFG TTSGGAFGTS AFGSSSNTGG
60 70 80 90 100
LFGNSQTKPG GLFGTNSFSQ PATSTSTGFG FGTSTGTSNS LFGTASTGTS
110 120 130 140 150
LFSSQNNAFA QNKPTGFGNF GTSTNSGGLF GTTNTTSNPF GSTSGSLFGP
160 170 180 190 200
SSFTAAPTGT TIKFNPPTGT DTMVKAGVST NISTKHQCIT AMKEYESKSL
210 220 230 240 250
EELRLEDYQA NRKGPQNQVG AGTTTGLFGS SPATSSATGL FSSSTTNSGF
260 270 280 290 300
AYGQNKTAFG TSTTGFGTNP GGLFGQQNQQ TTSLFSKPFG QATTTQNTGF
310 320 330 340 350
SFGNTSTLGQ PSTNTIGLFG VTQASQPGGL FGTATNTSTG TAFGTGTGLF
360 370 380 390 400
GQTNTGFGAV GSTLFGNNKL TTFGTSTTSA SSFGTTSGGL FGNKPTLTLG
410 420 430 440 450
TNTNTSNFGF GTNTSGNSIF GNKPAPGTLG TGLGAGFGTA LTDPNATAAQ
460 470 480 490 500
QAVLQQHLNS LTYSPFGDSP LFRNPMSDPK KKEERLKPTN PAAQKALTTP
510 520 530 540 550
THYKLTPRPA TRVRPKALQT TGTAKSHLFD GLDDDEPSLA NGAFMPKKSI
560 570 580 590 600
KKLVLKNLNN SNLFSPVNRD AEDLASPSEY PENGERFSFL SKPVDENHQQ
610 620 630 640 650
DGDDDSLVSR FYNNPIAKPI PQTPENSGSK HNSSNSVDDS IVALNMRVAL
660 670 680 690 700
RNGLEGSSEE TSFHDESLQD DREEIENNAY HVHPAGIVLT KVGYYTIPSM
710 720 730 740 750
DDLAKITNEK GECIVSDFTI GRKGYGSIYF EGDVNLTNLN LDDIVHIRRK
760 770 780 790 800
EVIVYLDDNQ KPPVGEGLNR KAEVTLDGVW PTDKTSRCLI KSPDRLADIN
810 820 830 840 850
YEGRLEAVSR KQGAQFKEYR PETGSWVFKV SHFSKYGLQD SDEEEEEHPS
860 870 880 890 900
KTSTKKLKTA PLPPAGQTTP FQMALNGKPA PPPQSQSPEV EQLGRVVELD
910 920 930 940 950
SDMVDITQEP VLDFALEESV PEDQEPVSAS THIASSLGIN PHVLQIMKAS
960 970 980 990 1000
LLADEEDVDT MDQRFSHLSS KGDTSQEICS PRLPISASHS SKSRSLVGGL
1010 1020 1030 1040 1050
LQSKFTSGVF LSPSASVQEC RTPRVSSLMN IPSTSSWSVP PPLTTVFTVP
1060 1070 1080 1090 1100
SPAPEVQLKT VGTRRQPGLV PLEKSVTFGK GKLLMDMALF MGRSFRVGWG
1110 1120 1130 1140 1150
PNWTLANSGE QLNGSHELEN HQLADSMEYG FLPNPVVVKS LTESPFKVHL
1160 1170 1180 1190 1200
EKLSLRQRKL DEDLQLYQTP LELKLKHSTV HVDELCPLIV PNPGVAVIHD
1210 1220 1230 1240 1250
YADWVKDASR ELLETQIVKH WSLTWTLCEA LWGHLKELDS QLDEPSEYIQ
1260 1270 1280 1290 1300
ILERRRAFSR WLSHTAAPQI EEEVSLTRKD NPVEAVFSYL TGSRISEACS
1310 1320 1330 1340 1350
LAQQSGDHRL ALLLSQLVGS QSVRELLTMQ LVDWHQLQAD CFIQDERLRI
1360 1370 1380 1390 1400
FALLAGKPVW QLSEQKQINV CSQLDWKRSL AVHLWYLLPP TASISRALSM
1410 1420 1430 1440 1450
YEEAFQNTSE GDRYACSPLP SYLENSGCMV EEEQDSRRPL QDVCFHLLKL
1460 1470 1480 1490 1500
YSDRHYDLNQ LLEPRSITAD PLDYRLSWHL WEVLRALNYT HLSEQSKGVL
1510 1520 1530 1540 1550
QASYAGQLES EGLWEWAIFV LLHIDNSSMR EKAVRELLTR HCQLMETPES
1560 1570 1580 1590 1600
WAKETFLTQK LCVPAEWIHE AKAVRAHMEC DKHLEALYLF KAGHWNRCHK
1610 1620 1630 1640 1650
LVIQHLASDA IINENYDYLK GFLEDLAPPE RSTLIQDWEM SGLVYLDYIR
1660 1670 1680 1690 1700
VIEMLHHIQQ VDCSGYELEQ LHTKVTSLCS RIEQIQCYNA KDRLAQSDMA
1710 1720 1730 1740 1750
KRVANLLRVV LSLQHAPDAT SDSTPDPHRV PLRLLAPHIG RLPMPEDYAL
1760
EELRSLTQSY LRELTVGSQ
Length:1,769
Mass (Da):193,340
Last modified:November 22, 2017 - v2
Checksum:i94F39A8F1BFBE9DA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01028793 Genomic DNA. No translation available.
AGTP01028794 Genomic DNA. No translation available.
AGTP01028795 Genomic DNA. No translation available.
RefSeqiXP_013213130.1. XM_013357676.1.

Genome annotation databases

EnsembliENSSTOT00000000739; ENSSTOP00000000661; ENSSTOG00000027525.
GeneIDi101962089.

Similar proteinsi

Entry informationi

Entry nameiI3LX94_ICTTR
AccessioniPrimary (citable) accession number: I3LX94
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: November 22, 2017
Last modified: January 31, 2018
This is version 24 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported