Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

RNA-binding protein fox-1 homolog 1

Gene

RBFOX1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein fox-1 homolog 1Imported
Gene namesi
Name:RBFOX1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 16

Organism-specific databases

EuPathDBiHostDB:ENSG00000078328.19.
HGNCiHGNC:18222. RBFOX1.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000078328.

PTM / Processingi

Proteomic databases

MaxQBiI3L1D4.
PeptideAtlasiI3L1D4.
PRIDEiI3L1D4.

Expressioni

Gene expression databases

BgeeiENSG00000078328.
ExpressionAtlasiI3L1D4. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliI3L1D4.
SMRiI3L1D4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini119 – 189RRMInterPro annotationAdd BLAST71

Phylogenomic databases

eggNOGiKOG0125. Eukaryota.
ENOG4111WJT. LUCA.
GeneTreeiENSGT00390000013767.

Family and domain databases

CDDicd12407. RRM_FOX1_like. 1 hit.
InterProiView protein in InterPro
IPR034237. FOX1_RRM.
IPR035979. RBD_domain_sf.
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.

Sequencei

Sequence statusi: Fragment.

I3L1D4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEKGSRMVQ QGNQEAAAAP DTMAQPYASA QFAPPQNGIP AEYTAPHPHP
60 70 80 90 100
APEYTGQTTV PEHTLNLYPP AQTHSEQSPA DTSAQTVSGT ATQTDDAAPT
110 120 130 140 150
DGQPQTQPSE NTENKSQPKR LHVSNIPFRF RDPDLRQMFG QFGKILDVEI
160 170 180
IFNERGSKGF GFVTFENSAD ADRAREKLHG TVVEGRKIE
Length:189
Mass (Da):20,661
Last modified:July 11, 2012 - v1
Checksum:i260D2E6DA6202F27
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei189Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005347 Genomic DNA. No translation available.
AC005364 Genomic DNA. No translation available.
AC005563 Genomic DNA. No translation available.
AC005569 Genomic DNA. No translation available.
AC005737 Genomic DNA. No translation available.
AC012175 Genomic DNA. No translation available.
AC023822 Genomic DNA. No translation available.
AC074051 Genomic DNA. No translation available.
KF495794 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000570626; ENSP00000458748; ENSG00000078328.
UCSCiuc059qnc.1. human.

Similar proteinsi

Entry informationi

Entry nameiI3L1D4_HUMAN
AccessioniPrimary (citable) accession number: I3L1D4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: January 31, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported