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Protein
Submitted name:

Ring finger protein 40

Gene

rnf40

Organism
Oreochromis niloticus (Nile tilapia) (Tilapia nilotica)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Ring finger protein 40Imported
Gene namesi
Name:rnf40Imported
OrganismiOreochromis niloticus (Nile tilapia) (Tilapia nilotica)Imported
Taxonomic identifieri8128 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaCichlomorphaeCichliformesCichlidaeAfrican cichlidsPseudocrenilabrinaeOreochrominiOreochromis
Proteomesi
  • UP000005207 Componenti: Unplaced

Interactioni

Protein-protein interaction databases

STRINGi8128.ENSONIP00000025124

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini952 – 991RING-typeInterPro annotationAdd BLAST40

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili58 – 88Sequence analysisAdd BLAST31
Coiled coili328 – 362Sequence analysisAdd BLAST35
Coiled coili385 – 429Sequence analysisAdd BLAST45
Coiled coili494 – 521Sequence analysisAdd BLAST28
Coiled coili543 – 577Sequence analysisAdd BLAST35
Coiled coili596 – 651Sequence analysisAdd BLAST56
Coiled coili656 – 676Sequence analysisAdd BLAST21
Coiled coili697 – 724Sequence analysisAdd BLAST28
Coiled coili727 – 761Sequence analysisAdd BLAST35
Coiled coili769 – 789Sequence analysisAdd BLAST21
Coiled coili804 – 824Sequence analysisAdd BLAST21
Coiled coili832 – 852Sequence analysisAdd BLAST21
Coiled coili867 – 894Sequence analysisAdd BLAST28
Coiled coili902 – 929Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0978 Eukaryota
ENOG410Y5C6 LUCA
GeneTreeiENSGT00390000002866
InParanoidiI3KVH8
OMAiQRVYSRG
OrthoDBiEOG091G01SA
TreeFamiTF323183

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR013956 E3_ubiquit_lig_Bre1
IPR018957 Znf_C3HC4_RING-type
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PANTHERiPTHR23163 PTHR23163, 1 hit
PfamiView protein in Pfam
PF00097 zf-C3HC4, 1 hit
SMARTiView protein in SMART
SM00184 RING, 1 hit
PROSITEiView protein in PROSITE
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequencei

Sequence statusi: Complete.

I3KVH8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGAGGGKRP PGGDSPPGPP EKKSKKEEKT TTTLIEPIRI AGVSSTEEMD
60 70 80 90 100
MKVLQFKNKK LCERLEQRQA MEDELREKIE KLEKRQATDD TTLLIVNRYW
110 120 130 140 150
SQLEENVRIL RKRIEPDPPV VSTPAPPSAT IPDQTPMEED SVNLASPSGV
160 170 180 190 200
PPPPVPEAQN EGERPEQQQE ERQEERQEEE QQQPPPPTGS DDLLTPSESQ
210 220 230 240 250
SDSKTDTSPP PPPLSENAKG FLSTLEQSSE EELTLHLQDR MQFSKEAIAC
260 270 280 290 300
LVCVFDRLHS HISDMCKVVQ AAGFEDDGQS DIINLNCTLL DENTRLRDLA
310 320 330 340 350
TLLQGRHHKM SMEYNELVDK VTSSETKVTE METTVEDLQW DIEKLRNREQ
360 370 380 390 400
KLNKHLAEAM EQLKSGYSST GSSGGLAGGQ ITLNIQKFES LNAELEHNQE
410 420 430 440 450
LANSRMAELE KLQVELQEAV RESEKLKMDL RNIPEEVVKE TLEYKCLQSQ
460 470 480 490 500
FSLLYNESLG VKTQLDEARA LLLTAKNAHL RQIEHMESDE LSLQKKLRTE
510 520 530 540 550
VIQLEDTLAQ VRKEYEMLRI EFEQNLAANE QAGPINREMR HLISSLQNHN
560 570 580 590 600
LQLKGDVQRY KRKLRETQLE INKLRCQSGD TGVLILEETT SDSIDVKKEE
610 620 630 640 650
DDDQEEEEER RRELERQRAR EREREREREA ERERERERER ERQRSDELKR
660 670 680 690 700
KDSDTLKMLR VELKKAQESQ KEMKLLLDMY KSAPKEQRDK VQLMAAERKS
710 720 730 740 750
KAEVDELRMR VRELEERERK ESKKLADEDA LRKIRVAEET IEHLQKKLAA
760 770 780 790 800
TKQEEEALLS EMDVTGQAFE DMQEQNSRLL QQLREKDDAN FKLMSERIKS
810 820 830 840 850
NQIYKLLKEE KEELADQVLA FKTQVDAQLL VVQKLEEKEG VLQSTLAALE
860 870 880 890 900
KELAVRTQAL ELNKRKAVEA AQLAEDLKVQ LEHTQAKLKE IQVSVAENRT
910 920 930 940 950
ARERESSNLK RAQEDLSRLR RKLEKQKKVE MYSDADEILQ EEINQYKAKL
960 970 980 990 1000
RCPCCNTRDK ETVLTKCFHV FCYECLKMRY DTRQRKCPKC NCAFGANDFH

RIYIT
Length:1,005
Mass (Da):116,419
Last modified:July 11, 2012 - v1
Checksum:iFD847DB8B735F649
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AERX01002320 Genomic DNA No translation available.
RefSeqiXP_013128448.1, XM_013272994.2

Genome annotation databases

EnsembliENSONIT00000025145; ENSONIP00000025124; ENSONIG00000019949
GeneIDi100694570

Similar proteinsi

Entry informationi

Entry nameiI3KVH8_ORENI
AccessioniPrimary (citable) accession number: I3KVH8
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: March 28, 2018
This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health