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Protein
Submitted name:

PHD finger protein 21Ab

Gene
N/A
Organism
Oreochromis niloticus (Nile tilapia) (Tilapia nilotica)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PHD finger protein 21AbImported
OrganismiOreochromis niloticus (Nile tilapia) (Tilapia nilotica)Imported
Taxonomic identifieri8128 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaCichlomorphaeCichliformesCichlidaeAfrican cichlidsPseudocrenilabrinaeOreochrominiOreochromis
Proteomesi
  • UP000005207 Componenti: Unplaced

Interactioni

Protein-protein interaction databases

STRINGi8128.ENSONIP00000022945.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini447 – 494PHD-typeInterPro annotationAdd BLAST48

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili30 – 57Sequence analysisAdd BLAST28
Coiled coili521 – 559Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0383. Eukaryota.
ENOG41112YM. LUCA.
GeneTreeiENSGT00530000063984.
InParanoidiI3KPA0.
OMAiHEDFCTV.
OrthoDBiEOG091G03CB.
TreeFamiTF331518.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00628. PHD. 1 hit.
SMARTiView protein in SMART
SM00249. PHD. 1 hit.
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiView protein in PROSITE
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

I3KPA0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELQTLQEAL KVEIQIHQKL VAQMKQDPQN ADLKKQLHEL QAKITALSEK
60 70 80 90 100
QKKVVEQLRK ELLVKQEPEA KLQLQVQTPP AGGDIKPANP LQSQQIPGAL
110 120 130 140 150
QQTLTVTPVL TTKTLVLKAA PGTVLPQRPP TVAMVTTAIT KPDSQNAPIN
160 170 180 190 200
LQVAGKLTNQ SSEPMRLVSK NAMVVQAAAA AQPIKVPQFV PPPRLTPRPA
210 220 230 240 250
FQPQVRPKLA TPTNVPIAPA PPPPMMAAPQ LLQRPVMLAT KLSSSLSSSA
260 270 280 290 300
PIHQVRIVNG QPCSKTGAAP LTGIVITTPV SAAPTRLASP AQVPVPTPVP
310 320 330 340 350
TQTPVQPIQI SSLTNEPKSS SSSSTPPVSP PPRPPKKEEN PEKLAFMVSL
360 370 380 390 400
GLVTHDHLEE IQSKRQERKR RTTANPVYSG AVFEPERKKS AVSYLNSPLH
410 420 430 440 450
QGTRKRGRPP KYSSVPDLVS LTPTSPSSPV HPLPLPSPSS GDGDIHEDFC
460 470 480 490 500
TVCRRSGQLL MCDTCSRVYH LDCLDPPLKT IPKGMWICPK CQDQILKKEE
510 520 530 540 550
AIPWPGTLAI VHSYIAYKEA KEEEKQKLMK WSSELKLERE QLEQRVKQLS
560 570 580 590 600
NSITKCMETK NTILARQKEM QLSLDKVKHL IRLIQAFNFN QALAETEGKD
610 620 630
VRVPDRAEAA VSSESPPKAN SAEKVKPGSS SA
Length:632
Mass (Da):68,959
Last modified:July 11, 2012 - v1
Checksum:i62555B54EE7AD561
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AERX01050093 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSONIT00000022965; ENSONIP00000022945; ENSONIG00000018218.

Similar proteinsi

Entry informationi

Entry nameiI3KPA0_ORENI
AccessioniPrimary (citable) accession number: I3KPA0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: August 30, 2017
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported