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I3ITP7

- I3ITP7_DANRE

UniProt

I3ITP7 - I3ITP7_DANRE

Protein
Submitted name:

Uncharacterized protein

Gene

neu3.1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (11 Jul 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. exo-alpha-sialidase activity Source: InterPro

    Enzyme and pathway databases

    ReactomeiREACT_221391. Glycosphingolipid metabolism.
    REACT_221720. Sialic acid metabolism.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:neu3.1Imported
    OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
    Taxonomic identifieri7955 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
    ProteomesiUP000000437: Chromosome 21

    Organism-specific databases

    ZFINiZDB-GENE-061201-39. neu3.1.

    Expressioni

    Gene expression databases

    BgeeiI3ITP7.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000011171.
    KOiK12357.
    OrthoDBiEOG7MSMNP.

    Family and domain databases

    Gene3Di2.120.10.10. 1 hit.
    InterProiIPR026944. Sialidase-3.
    IPR026856. Sialidase_fam.
    IPR011040. Sialidases.
    [Graphical view]
    PANTHERiPTHR10628. PTHR10628. 1 hit.
    PTHR10628:SF7. PTHR10628:SF7. 1 hit.
    SUPFAMiSSF50939. SSF50939. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I3ITP7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIDNMASKSY PEAQRPPPAR TVLFQQKDGK TYRIPALIYI SDGQTFLAFA    50
    EERSTPRDSD AKVLVMRKGS LHNGSLQWTS AQTLTSACLP DHRTMNPCPV 100
    YERKSKTIYL FFICISGNTT EYHQIAMGRN RARLCYITSA DYGETWSELT 150
    DLTNSVIGDE IHNWATFAVG PGHGIQMKSG RLIIPAYVYY VHCRCFPFNF 200
    PLIVRPHALS FYSDDCGVTW QMGGKIQMKS CECEMAEIID HADQSHLYCN 250
    ARSTCGYRIE ALSETSGAAF DNPHVARKLV EPRHGCQGSV LSFPVPQPLD 300
    EEEKKATDCL TQSDSKTWLL YSHPTNKKKR KDLGVYLNKS PLNASGWSRP 350
    WIIYKGPSGY SDLTQCEERF GCLMECGEKS EIEGIAFVEF KLNDLLCS 398
    Length:398
    Mass (Da):44,846
    Last modified:July 11, 2012 - v1
    Checksum:iB9CB0D729950C2E7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU915534 Genomic DNA. No translation available.
    RefSeqiXP_005161262.1. XM_005161205.1.
    UniGeneiDr.90312.

    Genome annotation databases

    EnsembliENSDART00000151654; ENSDARP00000126320; ENSDARG00000096382.
    GeneIDi780844.
    KEGGidre:780844.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU915534 Genomic DNA. No translation available.
    RefSeqi XP_005161262.1. XM_005161205.1.
    UniGenei Dr.90312.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSDART00000151654 ; ENSDARP00000126320 ; ENSDARG00000096382 .
    GeneIDi 780844.
    KEGGi dre:780844.

    Organism-specific databases

    CTDi 780844.
    ZFINi ZDB-GENE-061201-39. neu3.1.

    Phylogenomic databases

    GeneTreei ENSGT00390000011171.
    KOi K12357.
    OrthoDBi EOG7MSMNP.

    Enzyme and pathway databases

    Reactomei REACT_221391. Glycosphingolipid metabolism.
    REACT_221720. Sialic acid metabolism.

    Gene expression databases

    Bgeei I3ITP7.

    Family and domain databases

    Gene3Di 2.120.10.10. 1 hit.
    InterProi IPR026944. Sialidase-3.
    IPR026856. Sialidase_fam.
    IPR011040. Sialidases.
    [Graphical view ]
    PANTHERi PTHR10628. PTHR10628. 1 hit.
    PTHR10628:SF7. PTHR10628:SF7. 1 hit.
    SUPFAMi SSF50939. SSF50939. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Ensembl
      Submitted (MAY-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: TuebingenImported.
    2. "The zebrafish reference genome sequence and its relationship to the human genome."
      Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
      , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
      Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TuebingenImported.

    Entry informationi

    Entry nameiI3ITP7_DANRE
    AccessioniPrimary (citable) accession number: I3ITP7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 11, 2012
    Last sequence update: July 11, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3