Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Transcriptional regulator, DeoR family

Gene

EC12264_3292

Organism
Escherichia coli 1.2264
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi20 – 39H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, DeoR familyImported
Gene namesi
ORF Names:EC12264_3292Imported
OrganismiEscherichia coli 1.2264Imported
Taxonomic identifieri869675 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000005354 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Structurei

3D structure databases

ProteinModelPortaliI2SSJ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 58HTH deoR-typeInterPro annotationAdd BLAST56

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR014036. DeoR_C.
IPR001034. DeoR_HTH.
IPR037171. NagB/RpiA_transferase-like.
IPR018356. Tscrpt_reg_HTH_DeoR_CS.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF00455. DeoRC. 1 hit.
PF08220. HTH_DeoR. 1 hit.
PRINTSiPR00037. HTHLACR.
SMARTiView protein in SMART
SM00420. HTH_DEOR. 1 hit.
SUPFAMiSSF100950. SSF100950. 1 hit.
SSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS00894. HTH_DEOR_1. 1 hit.
PS51000. HTH_DEOR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

I2SSJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAKDRIQAI KQMVANDKKV TVSNLSGIFQ VTEETIRRDL EKLEDEGFLT
60 70 80 90 100
RTYGGAVLNT AMLTENIHFY KRASSFYEEK QLIARKALPF IDNKTTMAAD
110 120 130 140 150
SSSTVMELLK LLQDRSGLTL LTNSAEAIHV LAQSEIKVVS TGGELNKNTL
160 170 180 190 200
SLQGRITKEI IRRYHVDIMV MSCKGLDINS GALDSNEAEA EIKKTMIRQA
210 220 230 240 250
TEVALLVDHS KFDRKAFVQL ADFSHINYII TDKSPGAEWI AFCKDNNIQL

VW
Length:252
Mass (Da):28,261
Last modified:July 11, 2012 - v1
Checksum:i7D76EBB55B1B270C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEZO02000019 Genomic DNA. Translation: EIH23763.1.
RefSeqiWP_000719096.1. NZ_AEZO02000019.1.

Genome annotation databases

EnsemblBacteriaiEIH23763; EIH23763; EC12264_3292.

Similar proteinsi

Entry informationi

Entry nameiI2SSJ2_ECOLX
AccessioniPrimary (citable) accession number: I2SSJ2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: March 28, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported