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I2KQ03 (I2KQ03_BURPE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:BP1026A_3896 EMBL EIF57305.1
OrganismBurkholderia pseudomallei 1026a EMBL EIF57305.1
Taxonomic identifier1085027 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group

Protein attributes

Sequence length3122 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EIF57305.1

Ontologies

Keywords
   Technical term3D-structure PDB 4G6V
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
I2KQ03 [UniParc].

Last modified July 11, 2012. Version 1.
Checksum: 2B2EC06CFD835534

FASTA3,122310,224
        10         20         30         40         50         60 
MNKNRYRVVF NRARGALMVV QENGRASHGS GSRDARAGVV PAWLSLSPFA LRHVALAVLV 

        70         80         90        100        110        120 
AAGVVPIWVN AQVVAGGAHA PSVIQTQNGL QQVNINRPGA SGVSMNTYNQ FDVPKPGIIL 

       130        140        150        160        170        180 
NNSPINVQTQ LGGIIGGNPN FQAGDAARLI VNQVNSNNPS FIRGKVEIGG AAAQLVIANQ 

       190        200        210        220        230        240 
AGLVVDGGGF LNTSRATLTT GNPNFGPDGS LTGFNVNQGL ISVVGAGLDT ANVDQVDLLA 

       250        260        270        280        290        300 
RAVQINAKAY AKTLNVVAGS NQVDYNTLNA TPIAANGPAP TIAIDVSQLG GMYANRVFLV 

       310        320        330        340        350        360 
SSENGVGVAN AGDIAAQAGD LTLQANGRLV LSGHTNAAGN MSLSASGGIQ NSGVTYGKQS 

       370        380        390        400        410        420 
VTITTGADLT NSGALTAQQN LTANVGSLNS TGTLGAGINV DSTVGTSGDL NVTSSGQLTA 

       430        440        450        460        470        480 
TGTNSAAGNA TFTGSGVNLS NSATAANGNL ALTATAGDVN LAGSTVSAKG AVNAQASGTV 

       490        500        510        520        530        540 
VNDRGNLSSG AGMTLGGGSL SNQGGRANSQ GPLSVQMAGT VSNQNGMLSS QSTADVRGSA 

       550        560        570        580        590        600 
IQNNAGLIQS AGKQTIAGAS IDNSAGRLIS LNADGLSVTA TGALTNAAGA NVSGDPGGVI 

       610        620        630        640        650        660 
GGKGDVTVQG NTVTNSGSMS ADATLHVIGQ SVDNGNGALH AGQTTTVDAG NHLSNAGGRV 

       670        680        690        700        710        720 
EGQSAVLNGA TLDNSQGTVN AATVSLNGTT LLNHGGTVTQ TGTGPMTVAI TDTLDNSNNG 

       730        740        750        760        770        780 
LIQTRSTDLS LTSTTLINDN GGTITHVGPG TLTVGNGSGT VSNKAGAIAS NGRTVLQGKT 

       790        800        810        820        830        840 
IDNSAGSASG QTGLSVNAAD SITNLGGKLT SNANVDVTAG GALVNDGGEL GSKTAATTIH 

       850        860        870        880        890        900 
SASLSNLNGK IVSPTLTATV AGLLDNSQNG DFEANQLALT AANLKNQGGH ISQWQSGPTT 

       910        920        930        940        950        960 
LAVSGTLDNS NGGVIQTNST DLTLAPAVLD NSKGTITHGG TGTLTLTPGN GAGALQNTGG 

       970        980        990       1000       1010       1020 
TIGTNGQAIV KAGSLDNGSG VIAAKLGLSA TIAGAMNNTQ GLMRSNAALS IISNGALSNH 

      1030       1040       1050       1060       1070       1080 
QGHIEAGTPG DTSTLSIQAA SIDNTDGAVH DFGTGKMTVQ GGSQIVNSHA GGVDGMGQMT 

      1090       1100       1110       1120       1130       1140 
GQGDVTIGAA SISNTQGGQL MGANLLIQGA TLDNSGGQVG NVANATGDVN VAMSGAVTNT 

      1150       1160       1170       1180       1190       1200 
NGSITSTRDL SVAASTLLGG GAYSAARDAA INLQGDFTTT PQTQFNIGRD LTFTLPGTFA 

      1210       1220       1230       1240       1250       1260 
NSANLQSVHN LTVNAGNIVN TGAMTAGSLL STHSGDLTNY GAMVGGSVAI QASGTVSNLG 

      1270       1280       1290       1300       1310       1320 
PVALIGASDT SGLLEIVAHD IENRDDTTLG DSMPTTTIFG LGKVALAGGK DANGNYTNAA 

      1330       1340       1350       1360       1370       1380 
LINNSSAAIQ SGASMELHAD KVTNTRRVMQ TSGNTSQVDP ALLQQLGISM SGCAAYYIAA 

      1390       1400       1410       1420       1430       1440 
CSGQDVHWIN LFHDPNYPDY DPAPIIAALK LQPGGVFTVP PNGGQWNSGY QYTTYEGKAT 

      1450       1460       1470       1480       1490       1500 
ANTVTKLSPG AQIASGGDLD ASTVKTFQNY WSSVTAAGNI KQPASLDMDG WGATGQQAPG 

      1510       1520       1530       1540       1550       1560 
VTVVYSGYYH YNNYDNSEHN WTLPFGDKPF VGGPGGYTQA APADVRQYSL PDYRSTWGAN 

      1570       1580       1590       1600       1610       1620 
GTISGNGVSV NNTAANATIP SLGLLPGQAV PGLTIGTVSG NASGTQSGAA AIKGGTPTWV 

      1630       1640       1650       1660       1670       1680 
DPVIASATAV NVLSNLTIPQ GGLYRPNSAP NPTYLIETNP AFTRMNNFLS SDYYLNQIGV 

      1690       1700       1710       1720       1730       1740 
NPLTTEKRLG DGFYEQQLVR NQVTQLTGKA VLGPYTDLQG MYQSLMLAGA EWSKSLNLPL 

      1750       1760       1770       1780       1790       1800 
GMSLSAQQVA ALTTNVIIMQ TETVGGQQVL VPVVYLAKAD QQNANGPLIT AGNIDLKNTQ 

      1810       1820       1830       1840       1850       1860 
VFTNSGTVKA DTTLALQGKQ IDNAFGALQS GGLTSLDTTG NVDLTSANVK AGSLDLNAGN 

      1870       1880       1890       1900       1910       1920 
KLILDTATQT THQVSRDGAT SDKTTLGPAA NLNVAGDASI KTGGDFQQNA GNLNVGGNLN 

      1930       1940       1950       1960       1970       1980 
ANIGGNWNLG VQQTGEHKVV QRANGVSDTD LNSATGSTVN VGGKSAIGVG GDLTAQGARL 

      1990       2000       2010       2020       2030       2040 
DFGQGGTVAA KGNVTFGAAS TTSTINANSS GDQGNRSYAE TRHGSDQALT GTTVKGGDTL 

      2050       2060       2070       2080       2090       2100 
NVVSGKDINV IGSTIDLKKG DANLLAAGDV NVGAVTERHV YNSRETHSRS GVVSGTKIAS 

      2110       2120       2130       2140       2150       2160 
SQDATSTVAN GSLISADGVS IGSGKDINVQ GSTVVGTHDV ALNAAHDVNI TTSQDTSQSS 

      2170       2180       2190       2200       2210       2220 
TTYQEQHSGL MSGGGLSFSV GNSKLAQQNQ SSSVTNNAST VGSVDGNLTV NAGNTLHVKG 

      2230       2240       2250       2260       2270       2280 
SDLVAGKDVT GTAANIVVDS ATDTTRQAQQ QQTSKSGLTV GLSGSVGDAI NNAISETQAA 

      2290       2300       2310       2320       2330       2340 
RESAKDSNGR ASALHSIAAA GDVAFGGLGA KALLDGAKGP QAPSIGVQVS VGSSHSSMQS 

      2350       2360       2370       2380       2390       2400 
SEDQTIQRGS SINAGGNAKL IATGNGTPKD GNITIAGSNV NAANVALIAN NQVNLVNTTD 

      2410       2420       2430       2440       2450       2460 
TDKTQSSNSS SGSSVGVSIG TNGIGVSASM QRAHGDGNSD AAIQNNTHIN ASQTATIVSG 

      2470       2480       2490       2500       2510       2520 
GDTNVIGANV NANKVVADVG GNLNVASVQD TTVSAAHQSS AGGGFTISQT GGGASFSAQN 

      2530       2540       2550       2560       2570       2580 
GHADGNYAGV NEQAGIQAGS GGFDVTVKGN TDLKGAYIAS TADASKNSLT TGTLTTSDIE 

      2590       2600       2610       2620       2630       2640 
NHSHYSANSA GFSAGASVGV STKAVGPSSV SGSGGVTPMV FQNDSGDQSA TTKSAVSAGA 

      2650       2660       2670       2680       2690       2700 
INITKPGEQT QDVANLNRDA TNLNGTVSKT PDVQKMLSQQ ADTMNAAQAA GQTVSQGIGL 

      2710       2720       2730       2740       2750       2760 
YADGKRKDAI DAAKAAYERG DLVAMQSYID QAKSWDEGGA SRAGLQATGG ALIGGLGGGS 

      2770       2780       2790       2800       2810       2820 
VLTAIGGAAG AGTSSLLAGQ AEKISKSVGD MTGSSLVGNI AANVAATVGG ALVGGSAGAA 

      2830       2840       2850       2860       2870       2880 
MASNVELYNA GNDPQKTDDR ATIAGLQGLL NQAVAAGAKG LSTIANARNA IGNAISGALD 

      2890       2900       2910       2920       2930       2940 
SAADQFGTLM KRDAEGKMSQ SPAELVSQGV ANGINTVLGS KGGEPPLAGP SAVAVDSLTG 

      2950       2960       2970       2980       2990       3000 
QAANAALGAT DRTPPSNAIL SNSNSDNNST QGSQSGTVTK TPNPEATGSL SGKPTQIPPL 

      3010       3020       3030       3040       3050       3060 
SDEVTTRSLI RENQSAVTLA NKGYDVVQNP EVLGPKNPDY TINGQVFDNY APATGNVRNI 

      3070       3080       3090       3100       3110       3120 
ATTISNKVSS GQASNIVVNL ADSSASPAAI EAQINSYPIP GLGKVIVIDK LGNITIIKPK 


GN 

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References

[1]"Evolution of Burkholderia pseudomallei in recurrent melioidosis."
Hayden H.S., Lim R., Brittnacher M.J., Sims E.H., Ramage E.R., Fong C., Wu Z., Crist E., Chang J., Zhou Y., Radey M., Rohmer L., Haugen E., Gillett W., Wuthiekanun V., Peacock S.J., Kaul R., Miller S.I., Manoil C., Jacobs M.A.
PLoS ONE 7:E36507-E36507(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 1026a EMBL EIF57305.1.
[2]"Structural basis of toxicity and immunity in contact-dependent growth inhibition (CDI) systems."
Morse R.P., Nikolakakis K.C., Willett J.L., Gerrick E., Low D.A., Hayes C.S., Goulding C.W.
Proc. Natl. Acad. Sci. U.S.A. 109:21480-21485(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.64 ANGSTROMS) OF 2948-3122.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AHJA01000233 Genomic DNA. Translation: EIF57305.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4G6VX-ray2.64A/C/E/G2948-3122[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.160.20.10. 1 hit.
InterProIPR024973. ESPR.
IPR008619. Filamentous_hemagglutn_rpt.
IPR008638. Filamn_hemagglutn_N_bac.
IPR025157. Haemagluttinin_rpt.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
PfamPF13018. ESPR. 1 hit.
PF05594. Fil_haemagg. 5 hits.
PF13332. Fil_haemagg_2. 4 hits.
PF05860. Haemagg_act. 1 hit.
[Graphical view]
SMARTSM00912. Haemagg_act. 1 hit.
[Graphical view]
SUPFAMSSF51126. SSF51126. 1 hit.
TIGRFAMsTIGR01901. adhes_NPXG. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI2KQ03_BURPE
AccessionPrimary (citable) accession number: I2KQ03
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: July 9, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)