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Protein
Submitted name:

Ribosomal Protein, Large subunit

Gene

rpl-30

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • determination of adult lifespan Source: WormBase
  • translation Source: InterPro

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal Protein, Large subunitImported
Gene namesi
Name:rpl-30Imported
ORF Names:CELE_Y106G6H.3Imported, Y106G6H.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiY106G6H.3c; CE47526; WBGene00004444; rpl-30.

Subcellular locationi

PTM / Processingi

Proteomic databases

PaxDbiI2HAJ2.
PeptideAtlasiI2HAJ2.

Expressioni

Gene expression databases

BgeeiWBGene00004444.
ExpressionAtlasiI2HAJ2. baseline.

Structurei

3D structure databases

ProteinModelPortaliI2HAJ2.
SMRiI2HAJ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 86Ribosomal_L7AeInterPro annotationAdd BLAST85

Phylogenomic databases

eggNOGiKOG2988. Eukaryota.
COG1911. LUCA.
GeneTreeiENSGT00390000012138.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
InterProiView protein in InterPro
IPR029064. L30e-like.
IPR000231. Ribosomal_L30e.
IPR022991. Ribosomal_L30e_CS.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
PANTHERiPTHR11449:SF5. PTHR11449:SF5. 1 hit.
PfamiView protein in Pfam
PF01248. Ribosomal_L7Ae. 1 hit.
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiView protein in PROSITE
PS00993. RIBOSOMAL_L30E_2. 1 hit.

Sequencei

Sequence statusi: Complete.

I2HAJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVMKTGQYVL GYKQTLKSLL NGKAKLVIIA NNTPPLRKSE IEYYAMLAKT
60 70 80 90
GVHHYNGNNI ELGTACGRLF RVCTLAVTDA GDSDIILSVP SESA
Length:94
Mass (Da):10,188
Last modified:July 11, 2012 - v1
Checksum:iF0C45A21732225C9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCH63920.1.
RefSeqiNP_001263476.1. NM_001276547.1.
UniGeneiCel.6902.

Genome annotation databases

EnsemblMetazoaiY106G6H.3c.1; Y106G6H.3c.1; WBGene00004444.
Y106G6H.3c.2; Y106G6H.3c.2; WBGene00004444.
GeneIDi172921.

Similar proteinsi

Entry informationi

Entry nameiI2HAJ2_CAEEL
AccessioniPrimary (citable) accession number: I2HAJ2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: August 30, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported