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I2GAD8 (I2GAD8_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:HLA-B EMBL CCH27330.1
OrganismHomo sapiens (Human) EMBL CCH27330.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length312 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the MHC class I family. RuleBase RU004439

Contains Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS027648

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CCH27330.1
Non-terminal residue3121 EMBL CCH27330.1

Sequences

Sequence LengthMass (Da)Tools
I2GAD8 [UniParc].

Last modified July 11, 2012. Version 1.
Checksum: 2DE014EAF8CDB724

FASTA31235,406
        10         20         30         40         50         60 
SHSMRYFDTA MSRPGRGEPR FISVGYVDDT QFVRFDSDAA SPREEPRAPW IEQEGPEYWD 

        70         80         90        100        110        120 
RNTQIFKTNT QTDRESLRNL RGYYNQSDAG SHTLQSMYGC DVGPDGRLLR GHNQYAYDGK 

       130        140        150        160        170        180 
DYIALNEDLR SWTAADTAAQ ITQRKWEAAR VAEQDRAYLE GTCVEWLRRY LENGKDTLER 

       190        200        210        220        230        240 
ADPPKTHVTH HPISDHEATL RCWALGFYPA EITLTWQRDG EDQTQDTELV ETRPAGDRTF 

       250        260        270        280        290        300 
QKWAAVVVPS GEEQRYTCHV QHEGLPKPLT LRWEPSSQST VPIVGIVAGL AVLAVVVIGA 

       310 
VVAAVMCRRK SS 

« Hide

References

[1]"6 new sequences found during routine HLA typing."
Anholts J.D.H.
Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Blood EMBL CCH27330.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE804040 Genomic DNA. Translation: CCH27330.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.30.500.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR011161. MHC_I-like_Ag-recog.
IPR011162. MHC_I/II-like_Ag-recog.
IPR027648. MHC_I_a.
IPR001039. MHC_I_a_a1/a2.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00129. MHC_I. 1 hit.
[Graphical view]
PRINTSPR01638. MHCCLASSI.
SMARTSM00407. IGc1. 1 hit.
[Graphical view]
SUPFAMSSF54452. SSF54452. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSHLA-B. human.
NextBio35532116.

Entry information

Entry nameI2GAD8_HUMAN
AccessionPrimary (citable) accession number: I2GAD8
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: October 16, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.