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I2FDN7 (I2FDN7_HELCP) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length251 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
I2FDN7 [UniParc].

Last modified July 11, 2012. Version 1.
Checksum: 986AFDEB1AF9BD2F

FASTA25128,845
        10         20         30         40         50         60 
MLLSEFEKRQ ANSQWLVSEK LDGVRGLWNG QKMYFRSGKP MNLPSEFVKD FPPFALDGEL 

        70         80         90        100        110        120 
YSPKLHFSQI ISILKNPQKQ NEILELKFYV FDVPHSAKDS LTQRLDELRT YLKSKPNVYI 

       130        140        150        160        170        180 
EIIPQRLMQG QDSIDRELQA VVDNGGEGLV LRTPNMPYQK GRSKYDFKLK TRQDAECKVI 

       190        200        210        220        230        240 
GHTQGKGKYD SMLGAIICEY NGKNFKIGSG LSDTLRHNPP PIGSIISFKF QGLTHNGTPR 

       250 
FPTFWRIKQE E 

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References

[1]"Complete genome sequence of Helicobacter cinaedi strain PAGU611 isolated from human bacteremia."
Goto T., Ogura Y., Hirakawa H., Tomida J., Morita Y., Akaike T., Hayashi T., Kawamura Y.
Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PAGU611.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012344 Genomic DNA. Translation: BAM12975.1.
RefSeqYP_006236086.1. NC_017761.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAM12975; BAM12975; HCN_1808.
GeneID12764972.
KEGGhcp:HCN_1808.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAVRGYWDG.

Enzyme and pathway databases

BioCycHCIN1172562:GLDZ-1851-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI2FDN7_HELCP
AccessionPrimary (citable) accession number: I2FDN7
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: October 16, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)