I2FA87 (I2FA87_HELCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL BAM11775.1

Gene names

Name:	alr EMBL BAM11775.1
Ordered Locus Names:	HCN_0483 EMBL BAM11775.1

Organism

Helicobacter cinaedi (strain PAGU611) [Complete proteome] [HAMAP] EMBL BAM11775.1

Taxonomic identifier

1172562 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter cinaedi

Protein attributes

Sequence length	348 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622
Molecular function	Isomerase SAAS SAAS020622
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I2FA87 [UniParc]. Last modified July 11, 2012. Version 1. Checksum: 292E4CB5404E63DD	FASTA	348	38,734
	10 20 30 40 50 60 MAEIILDSKA YKHNLNLIHS HINSHNKSNV EIAAVLKDNA YGHGLKEMAT IAAEYGIKSV 70 80 90 100 110 120 FVKNYNEAIQ IYKFFPQVTA FYGMPQGDFA KNIAFVIHDE KHISALPQGT KVELKVNVGM 130 140 150 160 170 180 NRNGIEPSEL ESFIQAILQK KLELIGVFSH NGYGDDLDSV FFHTQSNFAK LKQEVLHLSQ 190 200 210 220 230 240 KYGFAPPRFH SLSTSGAIRV ASEGGITDDL VRIGIGAYGY LDVSFENPIS DKLQKVASLY 250 260 270 280 290 300 ADRVSTRFLD KGERIGYSGC TTLNSPQVVS TYDIGYGDGF FRVNENHKVY IANGLQILPR 310 320 330 340 SSMDCFSCFC DEPRICVFND VTHLAKAFGT ISYEILTHLS PSIKRTII

References

[1]

"Complete genome sequence of Helicobacter cinaedi strain PAGU611 isolated from human bacteremia." Goto T., Ogura Y., Hirakawa H., Tomida J., Morita Y., Akaike T., Hayashi T., Kawamura Y. Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PAGU611.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP012344 Genomic DNA. Translation: BAM11775.1.
RefSeq	YP_006234886.1. NC_017761.1.
3D structure databases
ProteinModelPortal	I2FA87.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAM11775; BAM11775; HCN_0483.
GeneID	12763736.
KEGG	hcp:HCN_0483.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I2FA87_HELCP

Accession

Primary (citable) accession number: I2FA87

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2012
Last sequence update:	July 11, 2012
Last modified:	April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)