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I2EY86 (I2EY86_EMTOG) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
D-alanine--D-alanine ligase domain protein EMBL AFK04639.1
Gene names
Ordered Locus Names:Emtol_3511 EMBL AFK04639.1
OrganismEmticicia oligotrophica (strain DSM 17448 / GPTSA100-15) [Complete proteome] [HAMAP] EMBL AFK04639.1
Taxonomic identifier929562 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Emticicia ›

Protein attributes

Sequence length610 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Cell wall formation By similarity. SAAS SAAS005905

Catalytic activity

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine. SAAS SAAS005905

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity. SAAS SAAS005905

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. SAAS SAAS005905

Subcellular location

Cytoplasm By similarity SAAS SAAS005905.

Sequence similarities

Contains 1 ATP-grasp domain. SAAS SAAS005905

Sequences

Sequence LengthMass (Da)Tools
I2EY86 [UniParc].

Last modified July 11, 2012. Version 1.
Checksum: 9DDBBA6E97192CF2

FASTA61068,960
        10         20         30         40         50         60 
MPCYFLNGTL LAEPNCEQNL IMTNKIRVGV FFGGQARERE ISYLGGKTAF EHIDKAIFEP 

        70         80         90        100        110        120 
VPIFVDSLGH FIQINPELLY EDSIRDFFPS KNLNRGFRVY IESLGELNET QLYKLIYKVG 

       130        140        150        160        170        180 
KQVQPTDFSN LMDFAFVIMH GPQAEDGAIQ GLLEWYGIPY MGPGLMGSAV GIDKPMQNKL 

       190        200        210        220        230        240 
LSLVTGQKKK MVTFTRDEWQ VADRSKLFTD LINNIGFPFV VKAPHQGSSI GVAIVRKRSL 

       250        260        270        280        290        300 
EEFTKAIQQC FFETTFLKRE WEKMTDRQKR HLMEKTSNLD EGIGFPLYVN GKILHHPAEL 

       310        320        330        340        350        360 
MEELDALLFT LDSVTAISAN AEDHVMIEEF VVGQEFSCGV IQHDDGTALA LPPTEIYGEI 

       370        380        390        400        410        420 
QTFDFKSKYK SNVTKKRIPV ETSIENLNKI HDNLLKAFNN LGFSVVTRID GFLTPDSRVL 

       430        440        450        460        470        480 
LHDPNTLPGM SPASLIFKQM AEIGLTVTQS ITYFVRQSIR ERIRSGKNTV ALRNLLEKID 

       490        500        510        520        530        540 
SLIEGRVSAH RKKVAIIFGE TDEEYKTAQR KLGEYASSVA YEPVCVCAAR NGQMYKIPVN 

       550        560        570        580        590        600 
LMFKADIQDF GQNIGKSKHP FIAEIIRKAE KITNKYAGSF DTQVKKLSET ELAESVQFIF 

       610 
QCDSDTLVEL

« Hide

References

[1]"The complete genome of chromosome of Emticicia oligotrophica DSM 17448."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Teshima H., Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V. expand/collapse author list , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17448 / GPTSA100-15.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002961 Genomic DNA. Translation: AFK04639.1.
RefSeqYP_006874666.1. NC_018748.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFK04639; AFK04639; Emtol_3511.
GeneID13813389.
KEGGeol:Emtol_3511.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01921.

Enzyme and pathway databases

UniPathwayUPA00219.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
3.40.50.20. 1 hit.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR011127. Dala_Dala_lig_N.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 2 hits.
PF01820. Dala_Dala_lig_N. 1 hit.
[Graphical view]
SUPFAMSSF52440. PreATP-grasp-like. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI2EY86_EMTOG
AccessionPrimary (citable) accession number: I2EY86
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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