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Protein
Submitted name:

Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase

Gene

MYA_3219

Organism
Burkholderia sp. KJ006
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBSP416344:GL9Z-3296-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferaseImported
Gene namesi
ORF Names:MYA_3219Imported
OrganismiBurkholderia sp. KJ006Imported
Taxonomic identifieri416344 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000010108: Chromosome 2

Structurei

3D structure databases

ProteinModelPortaliI2DSF2.
SMRiI2DSF2. Positions 2-422.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

KOiK00823.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I2DSF2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNADLHARK NAATPRGVGV MCDFYAARAE NAELWDVEGR RFIDFAAGIA
60 70 80 90 100
VLNTGHRHPK IVKAIADQLN CFTHTAYQIV PYASYVELAE KINARAPGDY
110 120 130 140 150
PKKTAFFTTG AEAVENAIKI ARAATGRPGV IAFAGGFHGR TMMGMALTGK
160 170 180 190 200
VAPYKLNFGP FPGDVFHAPY PNPLHGVTTA DSIKAIEMLF KADIDPKRVA
210 220 230 240 250
AIIFEPVQGE GGFNPAPADF VRALRKICNE HGIMLIADEV QTGFARTGKL
260 270 280 290 300
FAMQQYDVLA DLITMAKSLA GGMPLSGVVG RADVMDAAAP GGLGGTYAGN
310 320 330 340 350
PLAVASAHAV LDIIDEEKLC ERATQLGDAL KAKLNALRAD IAPIADVRGP
360 370 380 390 400
GAMVAVEFVN PATGEPDADF TKRVQARALE RGLLLLVCGV YSNVVRFLFP
410 420
LTIPQAVFDE ALTILEEVLK ETVGVPA
Length:427
Mass (Da):45,427
Last modified:July 11, 2012 - v1
Checksum:i272757AF3D9BB6A1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003515 Genomic DNA. Translation: AFJ87578.1.
RefSeqiYP_006334309.1. NC_017921.1.

Genome annotation databases

EnsemblBacteriaiAFJ87578; AFJ87578; MYA_3219.
GeneIDi12970249.
KEGGibuk:MYA_3219.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003515 Genomic DNA. Translation: AFJ87578.1.
RefSeqiYP_006334309.1. NC_017921.1.

3D structure databases

ProteinModelPortaliI2DSF2.
SMRiI2DSF2. Positions 2-422.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFJ87578; AFJ87578; MYA_3219.
GeneIDi12970249.
KEGGibuk:MYA_3219.

Phylogenomic databases

KOiK00823.

Enzyme and pathway databases

BioCyciBSP416344:GL9Z-3296-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Endophytic Bacterium Burkholderia sp. Strain KJ006."
    Kwak M.J., Song J.Y., Kim S.Y., Jeong H., Kang S.G., Kim B.K., Kwon S.K., Lee C.H., Yu D.S., Park S.H., Kim J.F.
    J. Bacteriol. 194:4432-4433(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KJ006Imported.

Entry informationi

Entry nameiI2DSF2_9BURK
AccessioniPrimary (citable) accession number: I2DSF2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: January 7, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.