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Protein

Superoxide dismutase

Gene

sodA

Organism
Bacillus amyloliquefaciens Y2
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciBAMY1126211:GL8D-2694-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
ORF Names:MUS_2798Imported
OrganismiBacillus amyloliquefaciens Y2Imported
Taxonomic identifieri1126211 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000002878 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI2C7T2.
SMRiI2C7T2. Positions 2-199.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I2C7T2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYKLPELPY AYDALEPHID KETMTIHHTK HHNTYVTNLN KAIEGSALAE
60 70 80 90 100
KSVDELVADL NAVPEDIRTA VRNNGGGHAN HSLFWTLLSP NGGGEPTGEL
110 120 130 140 150
AEEIKSTFGS FDQFKEKFAA AAAGRFGSGW AWLVVNNGKL EITSTPNQDS
160 170 180 190 200
PLSEGKTPVL GLDVWEHAYY LNYQNRRPDY ISAFWNVVNW DEVARLYSEA

K
Length:201
Mass (Da):22,379
Last modified:July 11, 2012 - v1
Checksum:iD32DD80CA0ADC6B5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003332 Genomic DNA. Translation: AFJ62706.1.
RefSeqiYP_006329431.1. NC_017912.1.

Genome annotation databases

EnsemblBacteriaiAFJ62706; AFJ62706; MUS_2798.
KEGGibqy:MUS_2798.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003332 Genomic DNA. Translation: AFJ62706.1.
RefSeqiYP_006329431.1. NC_017912.1.

3D structure databases

ProteinModelPortaliI2C7T2.
SMRiI2C7T2. Positions 2-199.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFJ62706; AFJ62706; MUS_2798.
KEGGibqy:MUS_2798.

Phylogenomic databases

KOiK04564.

Enzyme and pathway databases

BioCyciBAMY1126211:GL8D-2694-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the plant growth promoting strain Bacillus amyloliquefaciens subsp. plantarum B9601-Y2 and expression of mersacidin and other secondary metabolites."
    He P., Hao K., Blom J., Ruckert C., Vater J., Mao Z., Wu Y., Hou M., He P., He Y., Borriss R.
    J. Biotechnol. 164:281-291(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y2Imported.

Entry informationi

Entry nameiI2C7T2_BACAM
AccessioniPrimary (citable) accession number: I2C7T2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: April 1, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.