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Protein

Alpha-amylase

Gene

amyE

Organism
Bacillus amyloliquefaciens Y2
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciBAMY1126211:GL8D-320-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:amyEImported
ORF Names:MUS_0286Imported
OrganismiBacillus amyloliquefaciens Y2Imported
Taxonomic identifieri1126211 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000002878 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

I2C144-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKMFKKRFK TSLLPLFAGF LLLFHLVLSG PAAANAETAH KSNEVTDSSV
60 70 80 90 100
KNGTILHAWN WSFNTLTENM KEIRDAGYAA IQTSPINQVK EGNQGDKSMS
110 120 130 140 150
NWYWLYQPTS YQIGNRYLGT EQEFKDMCAA AEKYGVKVIV DAVVNHTTSD
160 170 180 190 200
YGAISDEIKR IPNWTHGNTQ IKNWSDRWDI TQNALLGLYD WNTQNTEVQA
210 220 230 240 250
YLKGFLERAL NDGADGFRYD AAKHIELPDD GNYGSQFWPN ITNTSAEFQY
260 270 280 290 300
GEILQDSASR DTAYANYMNV TASNYGHSIR SALKNRNLSV SNISHYASDV
310 320 330 340 350
SADKLVTWVE SHDTYANDDE ESTWMSDDDI RLGWAVIGSR SGSTPLFFSR
360 370 380 390 400
PEGGGNGVRF PGKSQIGDRG SALFKDQAIT AVNQFHNEMA GQPEELSNPN
410 420 430 440 450
GNNQIFMNQR GSKGVVLANA GSSSVTINTS TKLPDGRYDN RAGAGSFQVA
460 470 480 490 500
NGKLTGTINA RSAAVLYPDD IGNAPHVFLE NYQTEAVHSF NDQLTVTLRA
510 520 530 540 550
NAKTAKAVYQ INNGQETAFK DGDRLTIGKE DPIGTTYNVK LTGTNGEGAS
560 570 580 590 600
RTQEYTFVKK DPSQTNIIGY QNPDHWGQVN AYIYKHDGGG AIELTGSWPG
610 620 630 640 650
KAMTKNADGI YTLTLPANAD TADAKVIFNN GSAQVPGQNQ PGFDYVQNGL
660
YNNSGLNGYL TH
Length:662
Mass (Da):72,689
Last modified:July 10, 2012 - v1
Checksum:iEEA28DB236C3FC8D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003332 Genomic DNA. Translation: AFJ60368.1.
RefSeqiWP_014720693.1. NC_017912.1.
YP_006327093.1. NC_017912.1.

Genome annotation databases

EnsemblBacteriaiAFJ60368; AFJ60368; MUS_0286.
KEGGibqy:MUS_0286.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003332 Genomic DNA. Translation: AFJ60368.1.
RefSeqiWP_014720693.1. NC_017912.1.
YP_006327093.1. NC_017912.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFJ60368; AFJ60368; MUS_0286.
KEGGibqy:MUS_0286.

Phylogenomic databases

KOiK01176.

Enzyme and pathway databases

BioCyciBAMY1126211:GL8D-320-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the plant growth promoting strain Bacillus amyloliquefaciens subsp. plantarum B9601-Y2 and expression of mersacidin and other secondary metabolites."
    He P., Hao K., Blom J., Ruckert C., Vater J., Mao Z., Wu Y., Hou M., He P., He Y., Borriss R.
    J. Biotechnol. 164:281-291(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y2Imported.

Entry informationi

Entry nameiI2C144_BACAM
AccessioniPrimary (citable) accession number: I2C144
Entry historyi
Integrated into UniProtKB/TrEMBL: July 10, 2012
Last sequence update: July 10, 2012
Last modified: March 31, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.