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I2C144 (I2C144_BACAM) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=3.2.1.1 EMBL AFJ60368.1
Gene names
Name:amyE EMBL AFJ60368.1
ORF Names:MUS_0286 EMBL AFJ60368.1
OrganismBacillus amyloliquefaciens Y2 [Complete proteome] EMBL AFJ60368.1
Taxonomic identifier1126211 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length662 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Molecular functionGlycosidase EMBL AFJ60368.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I2C144 [UniParc].

Last modified July 11, 2012. Version 1.
Checksum: EEA28DB236C3FC8D

FASTA66272,689
        10         20         30         40         50         60 
MSKMFKKRFK TSLLPLFAGF LLLFHLVLSG PAAANAETAH KSNEVTDSSV KNGTILHAWN 

        70         80         90        100        110        120 
WSFNTLTENM KEIRDAGYAA IQTSPINQVK EGNQGDKSMS NWYWLYQPTS YQIGNRYLGT 

       130        140        150        160        170        180 
EQEFKDMCAA AEKYGVKVIV DAVVNHTTSD YGAISDEIKR IPNWTHGNTQ IKNWSDRWDI 

       190        200        210        220        230        240 
TQNALLGLYD WNTQNTEVQA YLKGFLERAL NDGADGFRYD AAKHIELPDD GNYGSQFWPN 

       250        260        270        280        290        300 
ITNTSAEFQY GEILQDSASR DTAYANYMNV TASNYGHSIR SALKNRNLSV SNISHYASDV 

       310        320        330        340        350        360 
SADKLVTWVE SHDTYANDDE ESTWMSDDDI RLGWAVIGSR SGSTPLFFSR PEGGGNGVRF 

       370        380        390        400        410        420 
PGKSQIGDRG SALFKDQAIT AVNQFHNEMA GQPEELSNPN GNNQIFMNQR GSKGVVLANA 

       430        440        450        460        470        480 
GSSSVTINTS TKLPDGRYDN RAGAGSFQVA NGKLTGTINA RSAAVLYPDD IGNAPHVFLE 

       490        500        510        520        530        540 
NYQTEAVHSF NDQLTVTLRA NAKTAKAVYQ INNGQETAFK DGDRLTIGKE DPIGTTYNVK 

       550        560        570        580        590        600 
LTGTNGEGAS RTQEYTFVKK DPSQTNIIGY QNPDHWGQVN AYIYKHDGGG AIELTGSWPG 

       610        620        630        640        650        660 
KAMTKNADGI YTLTLPANAD TADAKVIFNN GSAQVPGQNQ PGFDYVQNGL YNNSGLNGYL 


TH 

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References

[1]"Genome sequence of the plant growth promoting strain Bacillus amyloliquefaciens subsp. plantarum B9601-Y2 and expression of mersacidin and other secondary metabolites."
He P., Hao K., Blom J., Ruckert C., Vater J., Mao Z., Wu Y., Hou M., He P., He Y., Borriss R.
J. Biotechnol. 164:281-291(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Y2 EMBL AFJ60368.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003332 Genomic DNA. Translation: AFJ60368.1.
RefSeqYP_006327093.1. NC_017912.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFJ60368; AFJ60368; MUS_0286.
GeneID12963427.
KEGGbqy:MUS_0286.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycBAMY1126211:GL8D-320-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI2C144_BACAM
AccessionPrimary (citable) accession number: I2C144
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: January 22, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)