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I2A9C6

- I2A9C6_9MYCO

UniProt

I2A9C6 - I2A9C6_9MYCO

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

W7S_04585

Organism
Mycobacterium sp. MOTT36Y
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (11 Jul 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMSP1168287:GLGR-930-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:W7S_04585Imported
    OrganismiMycobacterium sp. MOTT36YImported
    Taxonomic identifieri1168287 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
    ProteomesiUP000002868: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I2A9C6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSPTAGPRVK LTNAEKVLYP ATGTTKSDIF DYYTRIAEVM IPHIAGRPAT    50
    RKRWPNGVEQ ESFFEKQLAA SAPDWLPRAS VTHRSGTTTY PIIDDPTGLA 100
    WIAQQAALEV HVPQWRFVAE WTRSRAEELK PGPATRLVFD LDPGEGVTMA 150
    QMSKVARAVR DLIAGIGLRT FPLTSGSKGL HLYAPLDEPV SSKGATVLAK 200
    RVAQQLEKTM PKLVTSTMTK SLRAGKIFLD WSQNNGSKTT IAPYSLRGRE 250
    HPTVAAPRTW DELDDPSLRQ LRYDEVLSRV ARDGDLLAEL DEDAPVPDRL 300
    TKYRSMRDAS KTPEPVPAAK PAVGQGNTFV IQEHHARRLH YDFRLERDGV 350
    LVSWAVPKNL PETTSVNHLA VHTEDHPLEY GGFEGVIPKG EYGAGKVIIW 400
    DSGTYDAEKF LDDEVIVNLH GSKISGRYAL IQTNGDQWLA HRMKDQKVFE 450
    FDTIAPMLAT HGSVTALKAG QWAFEGKWDG YRLLIEADHG AFRVRSRRGR 500
    EVTQEYRELR WLADDLADHH VVLDGEAVVL DSSGVPNFHE MQNRGRGSRV 550
    EFWAFDLLYL DGRSLLRARY RDRRKLLEML AAGSRLIVPD LLPGDGREAL 600
    EHSAERGWEG VIAKKRDSTY QPGRRSSSWI KDKHWNTQEV VIGGWKAGEG 650
    GRSSGIGSLL MGIPTAGGLH FAGRVGTGFT DRDLANLKKT LAPLHTDESP 700
    FDPPLPRSEA RGVTYVRPEL VGEVRYSEWT PDDRLRQSSW RGLRPDKEAS 750
    EVVRE 755
    Length:755
    Mass (Da):84,351
    Last modified:July 11, 2012 - v1
    Checksum:i48B07435B752DEBD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003491 Genomic DNA. Translation: AFJ33900.1.
    RefSeqiYP_006304627.1. NC_017904.1.

    Genome annotation databases

    EnsemblBacteriaiAFJ33900; AFJ33900; W7S_04585.
    GeneIDi12938752.
    KEGGimmm:W7S_04585.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003491 Genomic DNA. Translation: AFJ33900.1 .
    RefSeqi YP_006304627.1. NC_017904.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFJ33900 ; AFJ33900 ; W7S_04585 .
    GeneIDi 12938752.
    KEGGi mmm:W7S_04585.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci MSP1168287:GLGR-930-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Mycobacterium intracellulare clinical strain MOTT-36Y, belonging to the INT5 genotype."
      Kim B.J., Choi B.S., Choi I.Y., Lee J.H., Chun J., Hong S.H., Kook Y.H., Kim B.J.
      J. Bacteriol. 194:4141-4142(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MOTT36YImported.

    Entry informationi

    Entry nameiI2A9C6_9MYCO
    AccessioniPrimary (citable) accession number: I2A9C6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 11, 2012
    Last sequence update: July 11, 2012
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3