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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

W7S_04585

Organism
Mycobacterium sp. MOTT36Y
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP1168287:GLGR-930-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:W7S_04585Imported
OrganismiMycobacterium sp. MOTT36YImported
Taxonomic identifieri1168287 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
ProteomesiUP000002868 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR002755. DNA_primase_S.
IPR014146. LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I2A9C6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPTAGPRVK LTNAEKVLYP ATGTTKSDIF DYYTRIAEVM IPHIAGRPAT
60 70 80 90 100
RKRWPNGVEQ ESFFEKQLAA SAPDWLPRAS VTHRSGTTTY PIIDDPTGLA
110 120 130 140 150
WIAQQAALEV HVPQWRFVAE WTRSRAEELK PGPATRLVFD LDPGEGVTMA
160 170 180 190 200
QMSKVARAVR DLIAGIGLRT FPLTSGSKGL HLYAPLDEPV SSKGATVLAK
210 220 230 240 250
RVAQQLEKTM PKLVTSTMTK SLRAGKIFLD WSQNNGSKTT IAPYSLRGRE
260 270 280 290 300
HPTVAAPRTW DELDDPSLRQ LRYDEVLSRV ARDGDLLAEL DEDAPVPDRL
310 320 330 340 350
TKYRSMRDAS KTPEPVPAAK PAVGQGNTFV IQEHHARRLH YDFRLERDGV
360 370 380 390 400
LVSWAVPKNL PETTSVNHLA VHTEDHPLEY GGFEGVIPKG EYGAGKVIIW
410 420 430 440 450
DSGTYDAEKF LDDEVIVNLH GSKISGRYAL IQTNGDQWLA HRMKDQKVFE
460 470 480 490 500
FDTIAPMLAT HGSVTALKAG QWAFEGKWDG YRLLIEADHG AFRVRSRRGR
510 520 530 540 550
EVTQEYRELR WLADDLADHH VVLDGEAVVL DSSGVPNFHE MQNRGRGSRV
560 570 580 590 600
EFWAFDLLYL DGRSLLRARY RDRRKLLEML AAGSRLIVPD LLPGDGREAL
610 620 630 640 650
EHSAERGWEG VIAKKRDSTY QPGRRSSSWI KDKHWNTQEV VIGGWKAGEG
660 670 680 690 700
GRSSGIGSLL MGIPTAGGLH FAGRVGTGFT DRDLANLKKT LAPLHTDESP
710 720 730 740 750
FDPPLPRSEA RGVTYVRPEL VGEVRYSEWT PDDRLRQSSW RGLRPDKEAS

EVVRE
Length:755
Mass (Da):84,351
Last modified:July 11, 2012 - v1
Checksum:i48B07435B752DEBD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003491 Genomic DNA. Translation: AFJ33900.1.
RefSeqiWP_008253977.1. NC_017904.1.

Genome annotation databases

EnsemblBacteriaiAFJ33900; AFJ33900; W7S_04585.
KEGGimmm:W7S_04585.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003491 Genomic DNA. Translation: AFJ33900.1.
RefSeqiWP_008253977.1. NC_017904.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFJ33900; AFJ33900; W7S_04585.
KEGGimmm:W7S_04585.

Phylogenomic databases

KOiK01971.

Enzyme and pathway databases

BioCyciMSP1168287:GLGR-930-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR002755. DNA_primase_S.
IPR014146. LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Mycobacterium intracellulare clinical strain MOTT-36Y, belonging to the INT5 genotype."
    Kim B.J., Choi B.S., Choi I.Y., Lee J.H., Chun J., Hong S.H., Kook Y.H., Kim B.J.
    J. Bacteriol. 194:4141-4142(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MOTT36YImported.

Entry informationi

Entry nameiI2A9C6_9MYCO
AccessioniPrimary (citable) accession number: I2A9C6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: July 22, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.