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I2A9C6

- I2A9C6_9MYCO

UniProt

I2A9C6 - I2A9C6_9MYCO

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
W7S_04585
Organism
Mycobacterium sp. MOTT36Y
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP1168287:GLGR-930-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:W7S_04585Imported
OrganismiMycobacterium sp. MOTT36YImported
Taxonomic identifieri1168287 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000002868: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I2A9C6-1 [UniParc]FASTAAdd to Basket

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MSPTAGPRVK LTNAEKVLYP ATGTTKSDIF DYYTRIAEVM IPHIAGRPAT    50
RKRWPNGVEQ ESFFEKQLAA SAPDWLPRAS VTHRSGTTTY PIIDDPTGLA 100
WIAQQAALEV HVPQWRFVAE WTRSRAEELK PGPATRLVFD LDPGEGVTMA 150
QMSKVARAVR DLIAGIGLRT FPLTSGSKGL HLYAPLDEPV SSKGATVLAK 200
RVAQQLEKTM PKLVTSTMTK SLRAGKIFLD WSQNNGSKTT IAPYSLRGRE 250
HPTVAAPRTW DELDDPSLRQ LRYDEVLSRV ARDGDLLAEL DEDAPVPDRL 300
TKYRSMRDAS KTPEPVPAAK PAVGQGNTFV IQEHHARRLH YDFRLERDGV 350
LVSWAVPKNL PETTSVNHLA VHTEDHPLEY GGFEGVIPKG EYGAGKVIIW 400
DSGTYDAEKF LDDEVIVNLH GSKISGRYAL IQTNGDQWLA HRMKDQKVFE 450
FDTIAPMLAT HGSVTALKAG QWAFEGKWDG YRLLIEADHG AFRVRSRRGR 500
EVTQEYRELR WLADDLADHH VVLDGEAVVL DSSGVPNFHE MQNRGRGSRV 550
EFWAFDLLYL DGRSLLRARY RDRRKLLEML AAGSRLIVPD LLPGDGREAL 600
EHSAERGWEG VIAKKRDSTY QPGRRSSSWI KDKHWNTQEV VIGGWKAGEG 650
GRSSGIGSLL MGIPTAGGLH FAGRVGTGFT DRDLANLKKT LAPLHTDESP 700
FDPPLPRSEA RGVTYVRPEL VGEVRYSEWT PDDRLRQSSW RGLRPDKEAS 750
EVVRE 755
Length:755
Mass (Da):84,351
Last modified:July 11, 2012 - v1
Checksum:i48B07435B752DEBD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003491 Genomic DNA. Translation: AFJ33900.1.
RefSeqiYP_006304627.1. NC_017904.1.

Genome annotation databases

EnsemblBacteriaiAFJ33900; AFJ33900; W7S_04585.
GeneIDi12938752.
KEGGimmm:W7S_04585.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003491 Genomic DNA. Translation: AFJ33900.1 .
RefSeqi YP_006304627.1. NC_017904.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFJ33900 ; AFJ33900 ; W7S_04585 .
GeneIDi 12938752.
KEGGi mmm:W7S_04585.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci MSP1168287:GLGR-930-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Mycobacterium intracellulare clinical strain MOTT-36Y, belonging to the INT5 genotype."
    Kim B.J., Choi B.S., Choi I.Y., Lee J.H., Chun J., Hong S.H., Kook Y.H., Kim B.J.
    J. Bacteriol. 194:4141-4142(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MOTT36YImported.

Entry informationi

Entry nameiI2A9C6_9MYCO
AccessioniPrimary (citable) accession number: I2A9C6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: September 3, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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