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Protein

Alpha-amylase

Gene

PIN17_A0177

Organism
Prevotella intermedia (strain 17)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciPINT246198:GLIH-176-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:PIN17_A0177Imported
OrganismiPrevotella intermedia (strain 17)Imported
Taxonomic identifieri246198 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPrevotellaceaePrevotella
ProteomesiUP000010099 Componenti: Chromosome II

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR004867. CHB_HEX_C_dom.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF03174. CHB_HEX_C. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

I1YUY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMFAQGWKA NYGGVMLQGF YWDSYQDTKW TNLESQAKEF SDYFDLVWLP
60 70 80 90 100
QSAQARNNPS MGYDDYYWFS NYNSSFGTEA ELLSLIGTFK ANGIKTIADV
110 120 130 140 150
VINHRATTAG WFDFPTETYN NVTYTMTSKD VAKNDDGGEA LKQAQKEGVQ
160 170 180 190 200
LSDFMDSGED WPGMRDLDHN SANVQTTVKA YLQMLKDKFG YAGFRYDMVK
210 220 230 240 250
GYGGKFTALY NNASQPEFSV GEYWDGDLNK VKAWIESTKS DNVPTSAAFD
260 270 280 290 300
FPIRYTVRNA VNNGNWSAFD GIGLAKDPNY ARYAVTFVEN HDTEDRGGNS
310 320 330 340 350
HQDPIKKDTL AANAYILAMP GTPSIFLKHY QAYKSDIKNM ISVRKLMGIN
360 370 380 390 400
NESKAAKYSS SSDYYAFTTT GTNGEMLTVL GPAKSFSNTN RWIKLTGGYH
410 420 430 440 450
WAYYVEKSKA NFVWASLASG TYDGEQSVML TAISDDANAQ IVYTTDGSEP
460 470 480 490 500
TAGSAKATNG QVLTIPVGTT VLKAGLLVGG VVKNVIVRNY NIIDFKPYNI
510 520 530 540 550
KVYVNADEAD AAWASAKMTS TNPSINFWIW GGTHKTVKGS WPGDAVTTTE
560 570 580 590 600
TANGKKWFVK EFAITNSNDI VNLVFSVGTG SPQTVDIENI KATTFISISS
610 620 630 640 650
EKEGGKNKVN VVSTDIDNVV AEQKGNNDPY YYTLSGQRIA KPTQRGIYIH

NGKKVLVK
Length:658
Mass (Da):72,735
Last modified:July 11, 2012 - v1
Checksum:iE16C9502DE3FE85D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003503 Genomic DNA. Translation: AFJ08925.1.
RefSeqiWP_014708915.1. NC_017861.1.
YP_006298227.1. NC_017861.1.

Genome annotation databases

EnsemblBacteriaiAFJ08925; AFJ08925; PIN17_A0177.
KEGGipit:PIN17_A0177.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003503 Genomic DNA. Translation: AFJ08925.1.
RefSeqiWP_014708915.1. NC_017861.1.
YP_006298227.1. NC_017861.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFJ08925; AFJ08925; PIN17_A0177.
KEGGipit:PIN17_A0177.

Enzyme and pathway databases

BioCyciPINT246198:GLIH-176-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR004867. CHB_HEX_C_dom.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF03174. CHB_HEX_C. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Heidelberg J., Mongodin E., Moffat K., Khouri H., Brinkac L., Durkin A.S., Duncan M., Nelson K.E.
    Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 17Imported.

Entry informationi

Entry nameiI1YUY6_PREI7
AccessioniPrimary (citable) accession number: I1YUY6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: May 27, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.