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I1YUY6 (I1YUY6_PREI7) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alpha-amylase RuleBase RU361134

EC=3.2.1.1 RuleBase RU361134
Gene names
Ordered Locus Names:PIN17_A0177 EMBL AFJ08925.1
OrganismPrevotella intermedia (strain 17) [Complete proteome] [HAMAP] EMBL AFJ08925.1
Taxonomic identifier246198 [NCBI]
Taxonomic lineageBacteriaBacteroidetesBacteroidiaBacteroidalesPrevotellaceaePrevotella

Protein attributes

Sequence length658 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I1YUY6 [UniParc].

Last modified July 11, 2012. Version 1.
Checksum: E16C9502DE3FE85D

FASTA65872,735
        10         20         30         40         50         60 
MAMFAQGWKA NYGGVMLQGF YWDSYQDTKW TNLESQAKEF SDYFDLVWLP QSAQARNNPS 

        70         80         90        100        110        120 
MGYDDYYWFS NYNSSFGTEA ELLSLIGTFK ANGIKTIADV VINHRATTAG WFDFPTETYN 

       130        140        150        160        170        180 
NVTYTMTSKD VAKNDDGGEA LKQAQKEGVQ LSDFMDSGED WPGMRDLDHN SANVQTTVKA 

       190        200        210        220        230        240 
YLQMLKDKFG YAGFRYDMVK GYGGKFTALY NNASQPEFSV GEYWDGDLNK VKAWIESTKS 

       250        260        270        280        290        300 
DNVPTSAAFD FPIRYTVRNA VNNGNWSAFD GIGLAKDPNY ARYAVTFVEN HDTEDRGGNS 

       310        320        330        340        350        360 
HQDPIKKDTL AANAYILAMP GTPSIFLKHY QAYKSDIKNM ISVRKLMGIN NESKAAKYSS 

       370        380        390        400        410        420 
SSDYYAFTTT GTNGEMLTVL GPAKSFSNTN RWIKLTGGYH WAYYVEKSKA NFVWASLASG 

       430        440        450        460        470        480 
TYDGEQSVML TAISDDANAQ IVYTTDGSEP TAGSAKATNG QVLTIPVGTT VLKAGLLVGG 

       490        500        510        520        530        540 
VVKNVIVRNY NIIDFKPYNI KVYVNADEAD AAWASAKMTS TNPSINFWIW GGTHKTVKGS 

       550        560        570        580        590        600 
WPGDAVTTTE TANGKKWFVK EFAITNSNDI VNLVFSVGTG SPQTVDIENI KATTFISISS 

       610        620        630        640        650 
EKEGGKNKVN VVSTDIDNVV AEQKGNNDPY YYTLSGQRIA KPTQRGIYIH NGKKVLVK 

« Hide

References

[1]Heidelberg J., Mongodin E., Moffat K., Khouri H., Brinkac L., Durkin A.S., Duncan M., Nelson K.E.
Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 17 EMBL AFJ08925.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003503 Genomic DNA. Translation: AFJ08925.1.
RefSeqYP_006298227.1. NC_017861.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFJ08925; AFJ08925; PIN17_A0177.
GeneID12849930.
KEGGpit:PIN17_A0177.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycPINT246198:GLIH-176-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR004867. CHB_HEX_C_dom.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF03174. CHB_HEX_C. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI1YUY6_PREI7
AccessionPrimary (citable) accession number: I1YUY6
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: July 9, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)