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I1YJP8

- I1YJP8_METFJ

UniProt

I1YJP8 - I1YJP8_METFJ

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Protein
Submitted name:

DNA ligase

Gene

Q7C_2001

Organism
Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP754477:GLGI-1994-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported
Gene namesi
Ordered Locus Names:Q7C_2001Imported
OrganismiMethylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7)Imported
Taxonomic identifieri754477 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesPiscirickettsiaceaeMethylophaga
ProteomesiUP000009145: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

I1YJP8-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MQLASVYQPE TAAPVSAYLI SEKYDGVRAI WTGTQLLTRN GNVINAPDWF
60 70 80 90 100
TDPLPDVWLD GELWTTHQDF ARLSGIVRTQ IPDDAEWQQV SYRVFDMPDS
110 120 130 140 150
TLPFELRYQH YTQLITQLNS AHIKPVQQVR VQSQAALQSL LKDKLATGAE
160 170 180 190 200
GLMLHLATAK HRGGRTRAVL KLKPYEDAEA VVIGHLPGKG KYINQLGALR
210 220 230 240 250
VKNEQGQIFA IGSGLSDQDR ASPPPIGTII TYRYQGYTKT GLPRFARFIR

IREPDPD
Length:257
Mass (Da):28,839
Last modified:July 11, 2012 - v1
Checksum:iE989F1F4DFC3BDD7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003380 Genomic DNA. Translation: AFJ03141.1.
RefSeqiWP_014704560.1. NC_017856.1.
YP_006293828.1. NC_017856.1.

Genome annotation databases

EnsemblBacteriaiAFJ03141; AFJ03141; Q7C_2001.
GeneIDi12843900.
KEGGimec:Q7C_2001.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003380 Genomic DNA. Translation: AFJ03141.1 .
RefSeqi WP_014704560.1. NC_017856.1.
YP_006293828.1. NC_017856.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFJ03141 ; AFJ03141 ; Q7C_2001 .
GeneIDi 12843900.
KEGGi mec:Q7C_2001.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci MSP754477:GLGI-1994-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7."
    Villeneuve C., Martineau C., Mauffrey F., Villemur R.
    J. Bacteriol. 194:4126-4127(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JAM7Imported.

Entry informationi

Entry nameiI1YJP8_METFJ
AccessioniPrimary (citable) accession number: I1YJP8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: October 1, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3