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I1YJP8

- I1YJP8_METFJ

UniProt

I1YJP8 - I1YJP8_METFJ

Protein
Submitted name:

DNA ligase

Gene

Q7C_2001

Organism
Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (11 Jul 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMSP754477:GLGI-1994-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Q7C_2001Imported
    OrganismiMethylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7)Imported
    Taxonomic identifieri754477 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesPiscirickettsiaceaeMethylophaga
    ProteomesiUP000009145: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I1YJP8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQLASVYQPE TAAPVSAYLI SEKYDGVRAI WTGTQLLTRN GNVINAPDWF    50
    TDPLPDVWLD GELWTTHQDF ARLSGIVRTQ IPDDAEWQQV SYRVFDMPDS 100
    TLPFELRYQH YTQLITQLNS AHIKPVQQVR VQSQAALQSL LKDKLATGAE 150
    GLMLHLATAK HRGGRTRAVL KLKPYEDAEA VVIGHLPGKG KYINQLGALR 200
    VKNEQGQIFA IGSGLSDQDR ASPPPIGTII TYRYQGYTKT GLPRFARFIR 250
    IREPDPD 257
    Length:257
    Mass (Da):28,839
    Last modified:July 11, 2012 - v1
    Checksum:iE989F1F4DFC3BDD7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003380 Genomic DNA. Translation: AFJ03141.1.
    RefSeqiWP_014704560.1. NC_017856.1.
    YP_006293828.1. NC_017856.1.

    Genome annotation databases

    EnsemblBacteriaiAFJ03141; AFJ03141; Q7C_2001.
    GeneIDi12843900.
    KEGGimec:Q7C_2001.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003380 Genomic DNA. Translation: AFJ03141.1 .
    RefSeqi WP_014704560.1. NC_017856.1.
    YP_006293828.1. NC_017856.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFJ03141 ; AFJ03141 ; Q7C_2001 .
    GeneIDi 12843900.
    KEGGi mec:Q7C_2001.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci MSP754477:GLGI-1994-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7."
      Villeneuve C., Martineau C., Mauffrey F., Villemur R.
      J. Bacteriol. 194:4126-4127(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JAM7Imported.

    Entry informationi

    Entry nameiI1YJP8_METFJ
    AccessioniPrimary (citable) accession number: I1YJP8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 11, 2012
    Last sequence update: July 11, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3