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I1Y572 (I1Y572_ACIBA) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
ORF Names:ABTJ_02945 EMBL AFI96535.1, ABTJ_03496 EMBL AFI97058.1
OrganismAcinetobacter baumannii MDR-TJ EMBL AFI97058.1
Taxonomic identifier889738 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Moraxellaceae › Acinetobacter › Acinetobacter calcoaceticus/baumannii complex ›

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
I1Y572 [UniParc].

Last modified July 11, 2012. Version 1.
Checksum: 56B9D9300174DF8A

FASTA39642,892
        10         20         30         40         50         60 
MAKAKFERNK PHVNVGTIGH VDHGKTTLTA AIATICAKTY GGEAKDYSQI DSAPEEKARG 

        70         80         90        100        110        120 
ITINTSHVEY DSPTRHYAHV DCPGHADYVK NMITGAAQMD GAILVCAATD GPMPQTREHI 

       130        140        150        160        170        180 
LLSRQVGVPY IIVFLNKCDL VDDEELLELV EMEVRELLST YDFPGDDTPV IRGSALAALN 

       190        200        210        220        230        240 
GEAGPYGEES VLALVAALDS YIPEPERAID KAFLMPIEDV FSISGRGTVV TGRVEAGIIK 

       250        260        270        280        290        300 
VGEEVEIVGI KDTVKTTVTG VEMFRKLLDE GRAGENCGIL LRGTKREEVQ RGQVLAKPGT 

       310        320        330        340        350        360 
IKPHTKFDAE VYVLSKEEGG RHTPFLNGYR PQFYFRTTDV TGAIQLKEGV EMVMPGDNVE 

       370        380        390 
MSVELIHPIA MDPGLRFAIR EGGRTVGAGV VAKVTA

« Hide

References

[1]"Genome sequence of Acinetobacter baumannii MDR-TJ."
Gao F., Wang Y., Liu Y.J., Wu X.M., Lv X., Gan Y.R., Song S.D., Huang H.
J. Bacteriol. 193:2365-2366(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MDR-TJ EMBL AFI97058.1.
[2]"Complete genome sequence of Acinetobacter baumannii MDR-TJ and insights into its mechanism of antibiotic resistance."
Huang H., Yang Z.L., Wu X.M., Wang Y., Liu Y.J., Luo H., Lv X., Gan Y.R., Song S.D., Gao F.
J. Antimicrob. Chemother. 67:2825-2832(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MDR-TJ EMBL AFI97058.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003500 Genomic DNA. Translation: AFI96535.1.
CP003500 Genomic DNA. Translation: AFI97058.1.
RefSeqYP_006290830.1. NC_017847.1.
YP_006291353.1. NC_017847.1.

3D structure databases

ProteinModelPortalI1Y572.
SMRI1Y572. Positions 5-394.
ModBaseSearch...

Proteomic databases

PRIDEI1Y572.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFI96535; AFI96535; ABTJ_02945.
AFI97058; AFI97058; ABTJ_03496.
GeneID12839452.
12840936.
KEGGabr:ABTJ_02945.
abr:ABTJ_03496.

Phylogenomic databases

KOK02358.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI1Y572_ACIBA
AccessionPrimary (citable) accession number: I1Y572
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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