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Protein
Submitted name:

Periplasmic alpha-amylase

Gene

D7S_02402

Organism
Aggregatibacter actinomycetemcomitans D7S-1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciAACT694569:GL7F-2290-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Periplasmic alpha-amylaseImported
Gene namesi
ORF Names:D7S_02402Imported
OrganismiAggregatibacter actinomycetemcomitans D7S-1Imported
Taxonomic identifieri694569 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeAggregatibacter
ProteomesiUP000002831 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi694569.D7S_2456.

Structurei

3D structure databases

ProteinModelPortaliI1XUM6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

I1XUM6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQKSILYFSL FCAGNTFAAW QHPQFNELND NAEKQLFQGQ ATLDKGNYSL
60 70 80 90 100
QFQNDDKCFQ PQTAVKLNQT ASLEPCHGDA PQLRIFRHGN YLAQIDTRSG
110 120 130 140 150
TPTLRISIER QPEPEAVAKT CPKWDQKPLE IDVSQTFADG DTVRDAYSGK
160 170 180 190 200
SAVVKNGKVT LTPDPLAGGL LLLEKSAVKN PSVFHWKNAT VYFVLTDRFH
210 220 230 240 250
NGNPHNDHSY GRQKDGMQEI GTFHGGDLKG LTEKLDYLQQ LGVNVIWISS
260 270 280 290 300
PLEQMHGWVG GGDKGDFPHY AYHGYYHQDW TKIDANMGTE QDLSHFIEQA
310 320 330 340 350
HKRGMKVIFD VVMNHTGYAT LADMQEFGFG SFYLKPEEMQ SVLGEKWTNW
360 370 380 390 400
KPKRGQNWHS FNDYINFGDS VSWAKWWGKD WVRSDIGDYD SPKFDDLKMS
410 420 430 440 450
LASLPDLKTE SDNAVGLPPF YHHKQTHAKA LQNAKVRDYL IGWLSDWVRN
460 470 480 490 500
YGVDGFRVDT AKHVEKSTWL ALKQSADAAL HQWQQKHPSE SSGEPFWMTG
510 520 530 540 550
EAWGHGVLKS DYYQNGFDAM INFDFQDQAK NALDCFAHID PVYQDMSDKL
560 570 580 590 600
KDFNVLSYLS SHDTRLFYHS DSQGNNAKQK IAANLLLLAP GAVQIYYGDE
610 620 630 640 650
SGRDFGPTGS DPMQGTRSDM NWQDLGTNGD KQALLTHWQT LARFRQAHPA
660 670 680
IGAGKQTTAK TEKYYAFSRE LDGDKVMVVW AGE
Length:683
Mass (Da):77,366
Last modified:July 11, 2012 - v1
Checksum:i6E912C2157F8F015
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003496 Genomic DNA. Translation: AFI88095.1.
RefSeqiWP_005550081.1. NC_017846.1.
YP_006287927.1. NC_017846.1.

Genome annotation databases

EnsemblBacteriaiAFI88095; AFI88095; D7S_02402.
KEGGiaan:D7S_02402.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003496 Genomic DNA. Translation: AFI88095.1.
RefSeqiWP_005550081.1. NC_017846.1.
YP_006287927.1. NC_017846.1.

3D structure databases

ProteinModelPortaliI1XUM6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi694569.D7S_2456.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFI88095; AFI88095; D7S_02402.
KEGGiaan:D7S_02402.

Phylogenomic databases

KOiK01176.

Enzyme and pathway databases

BioCyciAACT694569:GL7F-2290-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of naturally competent Aggregatibacter actinomycetemcomitans serotype a strain D7S-1."
    Chen C., Kittichotirat W., Chen W., Downey J.S., Si Y., Bumgarner R.
    J. Bacteriol. 192:2643-2644(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: D7S-1Imported.

Entry informationi

Entry nameiI1XUM6_AGGAC
AccessioniPrimary (citable) accession number: I1XUM6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: June 24, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.