I1XMR6 (I1XMR6_METNJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393
EC=1.15.1.1 RuleBase RU000393

Gene names

Ordered Locus Names:

Q7A_2908 EMBL AFI85685.1

Organism

Methylophaga sp. (strain JAM1) [Complete proteome] [HAMAP] EMBL AFI85685.1

Taxonomic identifier

754476 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Thiotrichales › Piscirickettsiaceae › Methylophaga

Protein attributes

Sequence length	170 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393
Cofactor	Binds 1 copper ion per subunit By similarity. RuleBase RU000393 Binds 1 zinc ion per subunit By similarity. RuleBase RU000393
Sequence similarities	Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Ontologies

Keywords
Domain	Signal EMBL AFI85685.1
Ligand	Copper RuleBase RU000393 Metal-binding RuleBase RU000393 Zinc RuleBase RU000393
Molecular function	Oxidoreductase RuleBase RU000393 EMBL AFI85685.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 18	18	Potential EMBL AFI85685.1
	Chain	19 – 170	152	Potential EMBL AFI85685.1		PRO_5000888381

Sequences

	Sequence		Length	Mass (Da)
	I1XMR6 [UniParc]. Last modified July 11, 2012. Version 1. Checksum: D42153BDFAFF1FD4	FASTA	170	17,686
	10 20 30 40 50 60 MKLLTCIMIA LTSSVAFADT QIELYEVDKQ GTGKSLGSVA VHQSAFGLVF TPDLKSLTPG 70 80 90 100 110 120 LHGFHVHQNP SCDAAEKDGE MVPALAAGGH YDPYNTGKHD TPWGSGHAGD LPPLYVADDG 130 140 150 160 170 TATHPVLAPR LTLKDLQGRS LMIHAGGDNH SDHPKPLGGG GARVACGVTD

References

[1]	"Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7." Villeneuve C., Martineau C., Mauffrey F., Villemur R. J. Bacteriol. 194:4126-4127(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JAM1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003390 Genomic DNA. Translation: AFI85685.1.
RefSeq	YP_006297330.1. NC_017857.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFI85685; AFI85685; Q7A_2908.
GeneID	12845304.
KEGG	mej:Q7A_2908.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K04565.
Family and domain databases
Gene3D	2.60.40.200. 1 hit.
InterPro	IPR024134. SOD_Cu/Zn_/chaperones. IPR018152. SOD_Cu/Zn_BS. IPR001424. SOD_Cu_Zn_dom. [Graphical view]
PANTHER	PTHR10003. PTHR10003. 1 hit.
Pfam	PF00080. Sod_Cu. 1 hit. [Graphical view]
SUPFAM	SSF49329. SOD_Cu_Zn. 1 hit.
PROSITE	PS00087. SOD_CU_ZN_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I1XMR6_METNJ

Accession

Primary (citable) accession number: I1XMR6

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2012
Last sequence update:	July 11, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)