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I1XL59

- I1XL59_METNJ

UniProt

I1XL59 - I1XL59_METNJ

Protein

Elongation factor Tu

Gene

tuf

Organism
Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (11 Jul 2012)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi19 – 268GTPUniRule annotation
    Nucleotide bindingi81 – 855GTPUniRule annotation
    Nucleotide bindingi136 – 1394GTPUniRule annotation

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-HAMAP
    3. translation elongation factor activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Elongation factorUniRule annotationImported

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciMSP754476:GLGH-2309-MONOMER.
    MSP754476:GLGH-2322-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Short name:
    EF-TuUniRule annotation
    Gene namesi
    Name:tufUniRule annotation
    Ordered Locus Names:Q7A_2324Imported, Q7A_2337Imported
    OrganismiMethylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1)Imported
    Taxonomic identifieri754476 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesPiscirickettsiaceaeMethylophaga
    ProteomesiUP000009144: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily.UniRule annotation
    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    KOiK02358.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I1XL59-1 [UniParc]FASTAAdd to Basket

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    MSKAKFERTK PHVNVGTIGH VDHGKTTLTA AITKVMAEAS GGEFKNYADI    50
    DNAPEERERG ITIATAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD 100
    GAILVVNAAD GPMPQTREHI LLSRQVGVPY IIVYLNKADM VDDAELIELV 150
    EMEVRELLDS YDFPGDDTPI IVGSALKALE GDTSEIGAPS IMRLAEAMDE 200
    YFPEPKRAID GAFLMPIEDV FSISGRGTVV TGRVERGIVK VGDELEIVGI 250
    KDTQKTTCTG VEMFRKLLDQ GQAGDNVGVL LRGTKREDVD RGQVLAHPGT 300
    IKPHTKFEAE VYILSKDEGG RHTPFFNGYR PQFYFRTTDV TGACELPSGV 350
    EMVMPGDNVK MDVTLINPIA MEEGLRFAIR EGGRTVGAGV VSKIVE 396
    Length:396
    Mass (Da):43,178
    Last modified:July 11, 2012 - v1
    Checksum:iBC7DE4736E52212C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003390 Genomic DNA. Translation: AFI85128.1.
    CP003390 Genomic DNA. Translation: AFI85140.1.
    RefSeqiWP_014707495.1. NC_017857.1.
    YP_006296773.1. NC_017857.1.
    YP_006296785.1. NC_017857.1.

    Genome annotation databases

    EnsemblBacteriaiAFI85128; AFI85128; Q7A_2324.
    AFI85140; AFI85140; Q7A_2337.
    GeneIDi12846133.
    12846146.
    KEGGimej:Q7A_2324.
    mej:Q7A_2337.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003390 Genomic DNA. Translation: AFI85128.1 .
    CP003390 Genomic DNA. Translation: AFI85140.1 .
    RefSeqi WP_014707495.1. NC_017857.1.
    YP_006296773.1. NC_017857.1.
    YP_006296785.1. NC_017857.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFI85128 ; AFI85128 ; Q7A_2324 .
    AFI85140 ; AFI85140 ; Q7A_2337 .
    GeneIDi 12846133.
    12846146.
    KEGGi mej:Q7A_2324.
    mej:Q7A_2337.

    Phylogenomic databases

    KOi K02358.

    Enzyme and pathway databases

    BioCyci MSP754476:GLGH-2309-MONOMER.
    MSP754476:GLGH-2322-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7."
      Villeneuve C., Martineau C., Mauffrey F., Villemur R.
      J. Bacteriol. 194:4126-4127(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JAM1Imported.
    2. "Methylophaga nitratireducenticrescens sp. nov. and Methylophaga frappieri sp. nov., isolated from the biofilm of the methanol-fed denitrification system treating the seawater at the Montreal Biodome."
      Villeneuve C., Martineau C., Mauffrey F., Villemur R.
      Int. J. Syst. Evol. Microbiol. 63:2216-2222(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: JAM1Imported.

    Entry informationi

    Entry nameiI1XL59_METNJ
    AccessioniPrimary (citable) accession number: I1XL59
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 11, 2012
    Last sequence update: July 11, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3