Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

I1XL59 (I1XL59_METNJ) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:Q7A_2324 EMBL AFI85128.1, Q7A_2337 EMBL AFI85140.1
OrganismMethylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) [Complete proteome] [HAMAP] EMBL AFI85128.1
Taxonomic identifier754476 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaThiotrichalesPiscirickettsiaceaeMethylophaga

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
I1XL59 [UniParc].

Last modified July 11, 2012. Version 1.
Checksum: BC7DE4736E52212C

FASTA39643,178
        10         20         30         40         50         60 
MSKAKFERTK PHVNVGTIGH VDHGKTTLTA AITKVMAEAS GGEFKNYADI DNAPEERERG 

        70         80         90        100        110        120 
ITIATAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVVNAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLSRQVGVPY IIVYLNKADM VDDAELIELV EMEVRELLDS YDFPGDDTPI IVGSALKALE 

       190        200        210        220        230        240 
GDTSEIGAPS IMRLAEAMDE YFPEPKRAID GAFLMPIEDV FSISGRGTVV TGRVERGIVK 

       250        260        270        280        290        300 
VGDELEIVGI KDTQKTTCTG VEMFRKLLDQ GQAGDNVGVL LRGTKREDVD RGQVLAHPGT 

       310        320        330        340        350        360 
IKPHTKFEAE VYILSKDEGG RHTPFFNGYR PQFYFRTTDV TGACELPSGV EMVMPGDNVK 

       370        380        390 
MDVTLINPIA MEEGLRFAIR EGGRTVGAGV VSKIVE 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7."
Villeneuve C., Martineau C., Mauffrey F., Villemur R.
J. Bacteriol. 194:4126-4127(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JAM1 EMBL AFI85128.1.
[2]"Methylophaga nitratireducenticrescens sp. nov. and Methylophaga frappieri sp. nov., isolated from the biofilm of the methanol-fed denitrification system treating the seawater at the Montreal Biodome."
Villeneuve C., Martineau C., Mauffrey F., Villemur R.
Int. J. Syst. Evol. Microbiol. 63:2216-2222(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JAM1 EMBL AFI85128.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003390 Genomic DNA. Translation: AFI85128.1.
CP003390 Genomic DNA. Translation: AFI85140.1.
RefSeqYP_006296773.1. NC_017857.1.
YP_006296785.1. NC_017857.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFI85128; AFI85128; Q7A_2324.
AFI85140; AFI85140; Q7A_2337.
GeneID12846133.
12846146.
KEGGmej:Q7A_2324.
mej:Q7A_2337.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycMSP754476:GLGH-2309-MONOMER.
MSP754476:GLGH-2322-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI1XL59_METNJ
AccessionPrimary (citable) accession number: I1XL59
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)