I1XH95 (I1XH95_METNJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase (ATP) EMBL AFI83764.1
EC=6.5.1.1 EMBL AFI83764.1

Gene names

Ordered Locus Names:

Q7A_922 EMBL AFI83764.1

Organism

Methylophaga sp. (strain JAM1) [Complete proteome] [HAMAP] EMBL AFI83764.1

Taxonomic identifier

754476 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Thiotrichales › Piscirickettsiaceae › Methylophaga

Protein attributes

Sequence length	281 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL AFI83764.1
Molecular function	Ligase EMBL AFI83764.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 20	20	Potential EMBL AFI83764.1
	Chain	21 – 281	261	Potential EMBL AFI83764.1		PRO_5000888032

Sequences

	Sequence		Length	Mass (Da)
	I1XH95 [UniParc]. Last modified July 11, 2012. Version 1. Checksum: A878C7617D85129D	FASTA	281	31,896
	10 20 30 40 50 60 MSKLILLFLA VFYFTIQVFA VGAETPPQVQ LANVYNQDNV SDVSNYLVSE KYDGVRAIWT 70 80 90 100 110 120 GEELLTRQGN PISAPEWFTA PLPAVWLDGE LWTRRQDFDS LSGIVRTQTP DDNLWREVNY 130 140 150 160 170 180 MVFDMPDAEL PFEQRYNNYS RLIEQINADH IQAVKQQRFD SNHALSEHLQ TLVENGAEGL 190 200 210 220 230 240 MLHLATAPHR SSRSDALLKL KPYFDDEAEV IAHLPGQGKY TGMLGALRVK NQQGIEFSIG 250 260 270 280 TGFTDADRAN PPPIGSIITY KYHGFTKNDV PRFASFLRIR E

References

[1]	"Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7." Villeneuve C., Martineau C., Mauffrey F., Villemur R. J. Bacteriol. 194:4126-4127(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JAM1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003390 Genomic DNA. Translation: AFI83764.1.
RefSeq	YP_006295409.1. NC_017857.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFI83764; AFI83764; Q7A_922.
GeneID	12846439.
KEGG	mej:Q7A_922.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

I1XH95_METNJ

Accession

Primary (citable) accession number: I1XH95

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2012
Last sequence update:	July 11, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)