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I1XH95

- I1XH95_METNJ

UniProt

I1XH95 - I1XH95_METNJ

Protein
Submitted name:

DNA ligase (ATP)

Gene

Q7A_922

Organism
Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (11 Jul 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMSP754476:GLGH-915-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:Q7A_922Imported
    OrganismiMethylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1)Imported
    Taxonomic identifieri754476 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesPiscirickettsiaceaeMethylophaga
    ProteomesiUP000009144: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2020 PotentialImportedAdd
    BLAST
    Chaini21 – 281261 PotentialImportedPRO_5000888032Add
    BLAST

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    I1XH95-1 [UniParc]FASTAAdd to Basket

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    MSKLILLFLA VFYFTIQVFA VGAETPPQVQ LANVYNQDNV SDVSNYLVSE    50
    KYDGVRAIWT GEELLTRQGN PISAPEWFTA PLPAVWLDGE LWTRRQDFDS 100
    LSGIVRTQTP DDNLWREVNY MVFDMPDAEL PFEQRYNNYS RLIEQINADH 150
    IQAVKQQRFD SNHALSEHLQ TLVENGAEGL MLHLATAPHR SSRSDALLKL 200
    KPYFDDEAEV IAHLPGQGKY TGMLGALRVK NQQGIEFSIG TGFTDADRAN 250
    PPPIGSIITY KYHGFTKNDV PRFASFLRIR E 281
    Length:281
    Mass (Da):31,896
    Last modified:July 11, 2012 - v1
    Checksum:iA878C7617D85129D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003390 Genomic DNA. Translation: AFI83764.1.
    RefSeqiWP_014706139.1. NC_017857.1.
    YP_006295409.1. NC_017857.1.

    Genome annotation databases

    EnsemblBacteriaiAFI83764; AFI83764; Q7A_922.
    GeneIDi12846439.
    KEGGimej:Q7A_922.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003390 Genomic DNA. Translation: AFI83764.1 .
    RefSeqi WP_014706139.1. NC_017857.1.
    YP_006295409.1. NC_017857.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFI83764 ; AFI83764 ; Q7A_922 .
    GeneIDi 12846439.
    KEGGi mej:Q7A_922.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci MSP754476:GLGH-915-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7."
      Villeneuve C., Martineau C., Mauffrey F., Villemur R.
      J. Bacteriol. 194:4126-4127(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JAM1Imported.

    Entry informationi

    Entry nameiI1XH95_METNJ
    AccessioniPrimary (citable) accession number: I1XH95
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 11, 2012
    Last sequence update: July 11, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3