Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

I1XH95

- I1XH95_METNJ

UniProt

I1XH95 - I1XH95_METNJ

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

DNA ligase (ATP)

Gene

Q7A_922

Organism
Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP754476:GLGH-915-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:Q7A_922Imported
OrganismiMethylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1)Imported
Taxonomic identifieri754476 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesPiscirickettsiaceaeMethylophaga
ProteomesiUP000009144: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020 PotentialImportedAdd
BLAST
Chaini21 – 281261 PotentialImportedPRO_5000888032Add
BLAST

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

I1XH95-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSKLILLFLA VFYFTIQVFA VGAETPPQVQ LANVYNQDNV SDVSNYLVSE
60 70 80 90 100
KYDGVRAIWT GEELLTRQGN PISAPEWFTA PLPAVWLDGE LWTRRQDFDS
110 120 130 140 150
LSGIVRTQTP DDNLWREVNY MVFDMPDAEL PFEQRYNNYS RLIEQINADH
160 170 180 190 200
IQAVKQQRFD SNHALSEHLQ TLVENGAEGL MLHLATAPHR SSRSDALLKL
210 220 230 240 250
KPYFDDEAEV IAHLPGQGKY TGMLGALRVK NQQGIEFSIG TGFTDADRAN
260 270 280
PPPIGSIITY KYHGFTKNDV PRFASFLRIR E
Length:281
Mass (Da):31,896
Last modified:July 11, 2012 - v1
Checksum:iA878C7617D85129D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003390 Genomic DNA. Translation: AFI83764.1.
RefSeqiWP_014706139.1. NC_017857.1.
YP_006295409.1. NC_017857.1.

Genome annotation databases

EnsemblBacteriaiAFI83764; AFI83764; Q7A_922.
GeneIDi12846439.
KEGGimej:Q7A_922.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003390 Genomic DNA. Translation: AFI83764.1 .
RefSeqi WP_014706139.1. NC_017857.1.
YP_006295409.1. NC_017857.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFI83764 ; AFI83764 ; Q7A_922 .
GeneIDi 12846439.
KEGGi mej:Q7A_922.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci MSP754476:GLGH-915-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7."
    Villeneuve C., Martineau C., Mauffrey F., Villemur R.
    J. Bacteriol. 194:4126-4127(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JAM1Imported.

Entry informationi

Entry nameiI1XH95_METNJ
AccessioniPrimary (citable) accession number: I1XH95
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: October 29, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3