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I1WWE5

- I1WWE5_BURP2

UniProt

I1WWE5 - I1WWE5_BURP2

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

BP1026B_II2379

Organism
Burkholderia pseudomallei (strain 1026b)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBPSE884204:GLA4-6103-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:BP1026B_II2379Imported
OrganismiBurkholderia pseudomallei (strain 1026b)Imported
Taxonomic identifieri884204 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group
ProteomesiUP000010087: Chromosome 2

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 2 hits.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 2 hits.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I1WWE5-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MAGKLSVYRS RRRFGETPEP EGARRSPRRT KGAGRAGDES KRRARGDAAA
60 70 80 90 100
SSRGERAARR GRAQQPAPAR GRSALHYVIQ EHHARRLHYD FRLELDGTLK
110 120 130 140 150
SWAIPKGPSL DPSVKRLAVH VEDHPLEYAA FEGEIPEGHY GAGSVIVWDR
160 170 180 190 200
GAWTPAGGVA AARAGYRAGK LSFTLDGDKL HGGWALVRGR GLRDSGGKHE
210 220 230 240 250
QWLLIKERDG DARDQADYDV LRARPGSVLG GARSARARRG RAAEPTERDA
260 270 280 290 300
AAPKRARASV PKGRAEAKTS GRAPRTVSNG TAGAGKGASK RASKREGTNT
310 320 330 340 350
GNGARSGKGS GKGAGEGVAT SRRKRAAAPQ SSDVDSADTD SPAARGLALP
360 370 380 390 400
AGLAARFGLS GAKRAALPRT LRPQLATLVD TPPPGKDWLY EAKFDGYRVL
410 420 430 440 450
IRIDRGAASR PIAVYTREGL DWSAKFAAQL DALARLPVDR GWLDGEAVVL
460 470 480 490 500
DRAGVPDFQA LQNALGAGRS NDVTLFLFDV PFLNGFDLRG VPLERRRALL
510 520 530 540 550
AALVAAHASD VLRYSESLAF EAADLLTGAC DAGLEGLIGK RRDGRYVEGR
560 570 580 590 600
SRSWIKLKCR RRQEFVIGGY TEPAGRRSGF GALLLGVYAR APGDEGERRT
610 620 630 640 650
RGAAETRDER RRASRTSRTS RAPDAGAARA PQARPLALRY VGRVGTGFGE
660 670 680 690 700
RTLRALARTL REHETGRMPF ADVPRERSGT PVHWVKPVLV AECEFAEWTG
710 720 730 740 750
DGIVRQASFV GLREDKPART IVREQPQSME TEAMNEHADE HTDEHTDARA
760 770 780 790 800
ERRTGGRTRR KARDGGARDA PPLARHPKRG DAGSSARKGA RDGEAGKRAA
810 820 830 840 850
AGSSPSSSPS SSTSTSPSIS ASGRTRGGGR SASRDRAGDA DEGANEGVND
860 870 880 890 900
HAPRERAGAP KVAGVRVSHP GRVIDPHTGT RKLDLVEYWE WIAPWLLPHL
910 920 930 940 950
KGRPVSLVRA PADIGGELFF QKHADKLEIP NVALHAGLDP GHEALITIDD
960 970 980 990 1000
VKGLVGAAQM GTIELHTWNA HVSNIEKPDR AVFDLDPDPS LDWRAVIEAA
1010 1020 1030 1040 1050
QLTRALLDEL GLVSFCKTSG GKGLHVVVPL ARHAGWDDVK AFAHAVARHM
1060 1070 1080 1090 1100
AATLPERFTA TMGPRNRKGK IFVDYLRNNR GASTIAAYSV RARPGLGVSV
1110 1120 1130 1140 1150
PIAWDELPDT TGAAQWTLAN LHERLDALKH DPWRAYAHVR QRVTAALRKR

LSDG
Length:1,154
Mass (Da):124,356
Last modified:July 11, 2012 - v1
Checksum:i1A450EC282E2257E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002834 Genomic DNA. Translation: AFI70589.1.
RefSeqiYP_006278987.1. NC_017832.1.

Genome annotation databases

EnsemblBacteriaiAFI70589; AFI70589; BP1026B_II2379.
GeneIDi12832788.
KEGGibpz:BP1026B_II2379.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002834 Genomic DNA. Translation: AFI70589.1 .
RefSeqi YP_006278987.1. NC_017832.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFI70589 ; AFI70589 ; BP1026B_II2379 .
GeneIDi 12832788.
KEGGi bpz:BP1026B_II2379.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci BPSE884204:GLA4-6103-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 2 hits.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 2 hits.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1026bImported.

Entry informationi

Entry nameiI1WWE5_BURP2
AccessioniPrimary (citable) accession number: I1WWE5
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: October 29, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3