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I1WWE5

- I1WWE5_BURP2

UniProt

I1WWE5 - I1WWE5_BURP2

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

BP1026B_II2379

Organism
Burkholderia pseudomallei (strain 1026b)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (11 Jul 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBPSE884204:GLA4-6103-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:BP1026B_II2379Imported
    OrganismiBurkholderia pseudomallei (strain 1026b)Imported
    Taxonomic identifieri884204 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group
    ProteomesiUP000010087: Chromosome 2

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 2 hits.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 2 hits.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I1WWE5-1 [UniParc]FASTAAdd to Basket

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    MAGKLSVYRS RRRFGETPEP EGARRSPRRT KGAGRAGDES KRRARGDAAA     50
    SSRGERAARR GRAQQPAPAR GRSALHYVIQ EHHARRLHYD FRLELDGTLK 100
    SWAIPKGPSL DPSVKRLAVH VEDHPLEYAA FEGEIPEGHY GAGSVIVWDR 150
    GAWTPAGGVA AARAGYRAGK LSFTLDGDKL HGGWALVRGR GLRDSGGKHE 200
    QWLLIKERDG DARDQADYDV LRARPGSVLG GARSARARRG RAAEPTERDA 250
    AAPKRARASV PKGRAEAKTS GRAPRTVSNG TAGAGKGASK RASKREGTNT 300
    GNGARSGKGS GKGAGEGVAT SRRKRAAAPQ SSDVDSADTD SPAARGLALP 350
    AGLAARFGLS GAKRAALPRT LRPQLATLVD TPPPGKDWLY EAKFDGYRVL 400
    IRIDRGAASR PIAVYTREGL DWSAKFAAQL DALARLPVDR GWLDGEAVVL 450
    DRAGVPDFQA LQNALGAGRS NDVTLFLFDV PFLNGFDLRG VPLERRRALL 500
    AALVAAHASD VLRYSESLAF EAADLLTGAC DAGLEGLIGK RRDGRYVEGR 550
    SRSWIKLKCR RRQEFVIGGY TEPAGRRSGF GALLLGVYAR APGDEGERRT 600
    RGAAETRDER RRASRTSRTS RAPDAGAARA PQARPLALRY VGRVGTGFGE 650
    RTLRALARTL REHETGRMPF ADVPRERSGT PVHWVKPVLV AECEFAEWTG 700
    DGIVRQASFV GLREDKPART IVREQPQSME TEAMNEHADE HTDEHTDARA 750
    ERRTGGRTRR KARDGGARDA PPLARHPKRG DAGSSARKGA RDGEAGKRAA 800
    AGSSPSSSPS SSTSTSPSIS ASGRTRGGGR SASRDRAGDA DEGANEGVND 850
    HAPRERAGAP KVAGVRVSHP GRVIDPHTGT RKLDLVEYWE WIAPWLLPHL 900
    KGRPVSLVRA PADIGGELFF QKHADKLEIP NVALHAGLDP GHEALITIDD 950
    VKGLVGAAQM GTIELHTWNA HVSNIEKPDR AVFDLDPDPS LDWRAVIEAA 1000
    QLTRALLDEL GLVSFCKTSG GKGLHVVVPL ARHAGWDDVK AFAHAVARHM 1050
    AATLPERFTA TMGPRNRKGK IFVDYLRNNR GASTIAAYSV RARPGLGVSV 1100
    PIAWDELPDT TGAAQWTLAN LHERLDALKH DPWRAYAHVR QRVTAALRKR 1150
    LSDG 1154
    Length:1,154
    Mass (Da):124,356
    Last modified:July 11, 2012 - v1
    Checksum:i1A450EC282E2257E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002834 Genomic DNA. Translation: AFI70589.1.
    RefSeqiWP_004553954.1. NC_017832.1.
    YP_006278987.1. NC_017832.1.

    Genome annotation databases

    EnsemblBacteriaiAFI70589; AFI70589; BP1026B_II2379.
    GeneIDi12832788.
    KEGGibpz:BP1026B_II2379.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002834 Genomic DNA. Translation: AFI70589.1 .
    RefSeqi WP_004553954.1. NC_017832.1.
    YP_006278987.1. NC_017832.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFI70589 ; AFI70589 ; BP1026B_II2379 .
    GeneIDi 12832788.
    KEGGi bpz:BP1026B_II2379.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci BPSE884204:GLA4-6103-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 2 hits.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 2 hits.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 1026bImported.

    Entry informationi

    Entry nameiI1WWE5_BURP2
    AccessioniPrimary (citable) accession number: I1WWE5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 11, 2012
    Last sequence update: July 11, 2012
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3