I1WWE5 (I1WWE5_BURPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AFI70589.1

Gene names

ORF Names:

BP1026B_II2379 EMBL AFI70589.1

Organism

Burkholderia pseudomallei 1026b EMBL AFI70589.1

Taxonomic identifier

884204 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group › Burkholderia pseudomallei

Protein attributes

Sequence length	1154 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AFI70589.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro DNA primase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I1WWE5 [UniParc]. Last modified July 11, 2012. Version 1. Checksum: 1A450EC282E2257E	FASTA	1,154	124,356
	10 20 30 40 50 60 MAGKLSVYRS RRRFGETPEP EGARRSPRRT KGAGRAGDES KRRARGDAAA SSRGERAARR 70 80 90 100 110 120 GRAQQPAPAR GRSALHYVIQ EHHARRLHYD FRLELDGTLK SWAIPKGPSL DPSVKRLAVH 130 140 150 160 170 180 VEDHPLEYAA FEGEIPEGHY GAGSVIVWDR GAWTPAGGVA AARAGYRAGK LSFTLDGDKL 190 200 210 220 230 240 HGGWALVRGR GLRDSGGKHE QWLLIKERDG DARDQADYDV LRARPGSVLG GARSARARRG 250 260 270 280 290 300 RAAEPTERDA AAPKRARASV PKGRAEAKTS GRAPRTVSNG TAGAGKGASK RASKREGTNT 310 320 330 340 350 360 GNGARSGKGS GKGAGEGVAT SRRKRAAAPQ SSDVDSADTD SPAARGLALP AGLAARFGLS 370 380 390 400 410 420 GAKRAALPRT LRPQLATLVD TPPPGKDWLY EAKFDGYRVL IRIDRGAASR PIAVYTREGL 430 440 450 460 470 480 DWSAKFAAQL DALARLPVDR GWLDGEAVVL DRAGVPDFQA LQNALGAGRS NDVTLFLFDV 490 500 510 520 530 540 PFLNGFDLRG VPLERRRALL AALVAAHASD VLRYSESLAF EAADLLTGAC DAGLEGLIGK 550 560 570 580 590 600 RRDGRYVEGR SRSWIKLKCR RRQEFVIGGY TEPAGRRSGF GALLLGVYAR APGDEGERRT 610 620 630 640 650 660 RGAAETRDER RRASRTSRTS RAPDAGAARA PQARPLALRY VGRVGTGFGE RTLRALARTL 670 680 690 700 710 720 REHETGRMPF ADVPRERSGT PVHWVKPVLV AECEFAEWTG DGIVRQASFV GLREDKPART 730 740 750 760 770 780 IVREQPQSME TEAMNEHADE HTDEHTDARA ERRTGGRTRR KARDGGARDA PPLARHPKRG 790 800 810 820 830 840 DAGSSARKGA RDGEAGKRAA AGSSPSSSPS SSTSTSPSIS ASGRTRGGGR SASRDRAGDA 850 860 870 880 890 900 DEGANEGVND HAPRERAGAP KVAGVRVSHP GRVIDPHTGT RKLDLVEYWE WIAPWLLPHL 910 920 930 940 950 960 KGRPVSLVRA PADIGGELFF QKHADKLEIP NVALHAGLDP GHEALITIDD VKGLVGAAQM 970 980 990 1000 1010 1020 GTIELHTWNA HVSNIEKPDR AVFDLDPDPS LDWRAVIEAA QLTRALLDEL GLVSFCKTSG 1030 1040 1050 1060 1070 1080 GKGLHVVVPL ARHAGWDDVK AFAHAVARHM AATLPERFTA TMGPRNRKGK IFVDYLRNNR 1090 1100 1110 1120 1130 1140 GASTIAAYSV RARPGLGVSV PIAWDELPDT TGAAQWTLAN LHERLDALKH DPWRAYAHVR 1150 QRVTAALRKR LSDG

References

[1]

Hayden H.H., Brittnacher M.J., Wu Z., Lim R., Sims E., Chang J., Fong C., Radey M., Rohmer L., Zhou Y., Gillett W., Haugen E., Bovee D., Jewett D., McMonagle E., Guenthner D., Levy R., Olson M.V. , Miller S.I., Kaul R., Jacobs M.A. Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: 1026b EMBL AFI70589.1.

[2]

"Evolution of Burkholderia pseudomallei in Recurrent Melioidosis." Hayden H.S., Lim R., Brittnacher M.J., Sims E.H., Ramage E.R., Fong C., Wu Z., Crist E., Chang J., Zhou Y., Radey M., Rohmer L., Haugen E., Gillett W., Wuthiekanun V., Peacock S.J., Kaul R., Miller S.I., Manoil C., Jacobs M.A. PLoS ONE 7:E36507-E36507(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: 1026b EMBL AFI70589.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002834 Genomic DNA. Translation: AFI70589.1.
RefSeq	YP_006278987.1. NC_017832.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFI70589; AFI70589; BP1026B_II2379.
GeneID	12832788.
KEGG	bpz:BP1026B_II2379.
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 2 hits.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR002755. DNA_primase_S. IPR014144. LigD_PE_domain. IPR014145. LigD_pol. IPR012340. NA-bd_OB-fold. IPR014143. NHEJ_ligase_prk. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF01896. DNA_primase_S. 1 hit. PF13298. LigD_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit. TIGR02778. ligD_pol. 1 hit. TIGR02779. NHEJ_ligase_lig. 1 hit. TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

I1WWE5_BURPE

Accession

Primary (citable) accession number: I1WWE5

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2012
Last sequence update:	July 11, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)