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Protein

Alpha-amylase

Gene

BANAN_04620

Organism
Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciBANI703613:GL91-944-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:BANAN_04620Imported
OrganismiBifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8)Imported
Taxonomic identifieri703613 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000009141 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.
OMAiDFNDAKC.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

I1WA54-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVIQHMHTAF RRTAGISVAL ATLCAGMVIA APNAANAAPA GTGSPQLPKA
60 70 80 90 100
THIQMIAFQQ TWNTIAEECW RTYGPEGIRY VEVSPPQESI RGTPWRTSYQ
110 120 130 140 150
PVSYRLDSKL GAEAEFKAMV EQCNAAGVGI IADVVLHQTT GSDVAAGEQT
160 170 180 190 200
GVAGTRYNGT TGDYPGFTGE SNRYPDGVTA ADFHDYNNGA SISDYKNQQE
210 220 230 240 250
VQEGRLSSMW DFDTSSEKVR QIQSDYLAKL YNMGVQGFRM DAVKHINNED
260 270 280 290 300
MKAIKDQMAR KVGTSADDIY WIQEVIGNAN EAPGIQPRNY LGTGTVTQFD
310 320 330 340 350
YKSDLNAKFK GKIAALKDLS TRIGDLSQNP NAIESKDANV FVTNWDTARN
360 370 380 390 400
DGAITYKNGS MYALANAFML AYDYGTPRLL SDYKYDVNDN GAPGATETAV
410 420 430 440 450
PDVDFSQTCS TKDADWNCQQ RWTTARTASR SRAVARASLR STTQLRARRR
460 470
NTRPRCPAAS TATSTRYRTV RRP
Length:473
Mass (Da):51,919
Last modified:July 11, 2012 - v1
Checksum:iDB57211B631D46AD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002567 Genomic DNA. Translation: AFI63136.1.
RefSeqiWP_014697771.1. NC_017834.1.
YP_006280099.1. NC_017834.1.

Genome annotation databases

EnsemblBacteriaiAFI63136; AFI63136; BANAN_04620.
KEGGibni:BANAN_04620.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002567 Genomic DNA. Translation: AFI63136.1.
RefSeqiWP_014697771.1. NC_017834.1.
YP_006280099.1. NC_017834.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFI63136; AFI63136; BANAN_04620.
KEGGibni:BANAN_04620.

Phylogenomic databases

KOiK01176.
OMAiDFNDAKC.

Enzyme and pathway databases

BioCyciBANI703613:GL91-944-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Short communication: the complete genome sequence of Bifidobacterium animalis subspecies animalis ATCC 25527(T) and comparative analysis of growth in milk with B. animalis subspecies lactis DSM 10140(T)."
    Loquasto J.R., Barrangou R., Dudley E.G., Roberts R.F.
    J. Dairy Sci. 94:5864-5870(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25527 / DSM 20104 / JCM 1190 / R101-8Imported.

Entry informationi

Entry nameiI1WA54_BIFAR
AccessioniPrimary (citable) accession number: I1WA54
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: June 24, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.