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I1WA54 (I1WA54_BIFAR) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length473 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I1WA54 [UniParc].

Last modified July 11, 2012. Version 1.
Checksum: DB57211B631D46AD

FASTA47351,919
        10         20         30         40         50         60 
MVIQHMHTAF RRTAGISVAL ATLCAGMVIA APNAANAAPA GTGSPQLPKA THIQMIAFQQ 

        70         80         90        100        110        120 
TWNTIAEECW RTYGPEGIRY VEVSPPQESI RGTPWRTSYQ PVSYRLDSKL GAEAEFKAMV 

       130        140        150        160        170        180 
EQCNAAGVGI IADVVLHQTT GSDVAAGEQT GVAGTRYNGT TGDYPGFTGE SNRYPDGVTA 

       190        200        210        220        230        240 
ADFHDYNNGA SISDYKNQQE VQEGRLSSMW DFDTSSEKVR QIQSDYLAKL YNMGVQGFRM 

       250        260        270        280        290        300 
DAVKHINNED MKAIKDQMAR KVGTSADDIY WIQEVIGNAN EAPGIQPRNY LGTGTVTQFD 

       310        320        330        340        350        360 
YKSDLNAKFK GKIAALKDLS TRIGDLSQNP NAIESKDANV FVTNWDTARN DGAITYKNGS 

       370        380        390        400        410        420 
MYALANAFML AYDYGTPRLL SDYKYDVNDN GAPGATETAV PDVDFSQTCS TKDADWNCQQ 

       430        440        450        460        470 
RWTTARTASR SRAVARASLR STTQLRARRR NTRPRCPAAS TATSTRYRTV RRP 

« Hide

References

[1]"Short communication: the complete genome sequence of Bifidobacterium animalis subspecies animalis ATCC 25527(T) and comparative analysis of growth in milk with B. animalis subspecies lactis DSM 10140(T)."
Loquasto J.R., Barrangou R., Dudley E.G., Roberts R.F.
J. Dairy Sci. 94:5864-5870(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25527 EMBL AFI63136.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002567 Genomic DNA. Translation: AFI63136.1.
RefSeqYP_006280099.1. NC_017834.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFI63136; AFI63136; BANAN_04620.
GeneID12835401.
KEGGbni:BANAN_04620.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.
OMAMAELANG.

Enzyme and pathway databases

BioCycBANI703613:GL91-944-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI1WA54_BIFAR
AccessionPrimary (citable) accession number: I1WA54
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: July 9, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)