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I1SC38

- I1SC38_MYCTX

UniProt

I1SC38 - I1SC38_MYCTX

Protein
Submitted name:

ATP-dependent DNA ligase LigC

Gene

TBSG_03799

Organism
Mycobacterium tuberculosis KZN 4207
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMTUB478433:GH4Y-3844-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase LigCImported
    Submitted name:
    ATP-dependent DNA ligase ligCImported
    Gene namesi
    ORF Names:TBSG_03799Imported, V459_03572Imported
    OrganismiMycobacterium tuberculosis KZN 4207Imported
    Taxonomic identifieri478433 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
    ProteomesiUP000005217: Chromosome

    Structurei

    3D structure databases

    SMRiI1SC38. Positions 6-340.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222508.
    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I1SC38-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQLPVMPPVS PMLAKSVTAI PPDASYEPKW DGFRSICFRD GDQVELGSRN    50
    ERPMTRYFPE LVAAIRAELP HRCVIDGEII IATDHGLDFE ALQQRIHPAE 100
    SRVRMLADRT PASFIAFDLL ALGDDDYTGR PFSERRAALV DAVTGSGADA 150
    DLSIHVTPAT TDMATAQRWF SEFEGAGLDG VIAKPPHITY QPDKRVMFKI 200
    KHLRTADCVV AGYRVHKSGS DAIGSLLLGL YQEDGQLASV GVIGAFPMAE 250
    RRRLLTELQP LVTSFDDHPW NWAAHVAGQR TPRKNEFSRW NVGKDLSFVP 300
    LRPERVVEVR YDHMEGARFR HTAQFNRWRP DRDPRSCSYA QLERPLTVSL 350
    SDIVPGLR 358
    Length:358
    Mass (Da):40,141
    Last modified:June 13, 2012 - v1
    Checksum:i22DA33D1A56196BD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001662 Genomic DNA. Translation: AEB05928.1.
    JLCP01000011 Genomic DNA. Translation: KBM94998.1.
    RefSeqiYP_005102267.1. NC_016768.1.

    Genome annotation databases

    EnsemblBacteriaiAEB05928; AEB05928; TBSG_03799.
    GeneIDi11695782.
    KEGGimtk:TBSG_03799.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001662 Genomic DNA. Translation: AEB05928.1 .
    JLCP01000011 Genomic DNA. Translation: KBM94998.1 .
    RefSeqi YP_005102267.1. NC_016768.1.

    3D structure databases

    SMRi I1SC38. Positions 6-340.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEB05928 ; AEB05928 ; TBSG_03799 .
    GeneIDi 11695782.
    KEGGi mtk:TBSG_03799.

    Phylogenomic databases

    HOGENOMi HOG000222508.
    KOi K01971.

    Enzyme and pathway databases

    BioCyci MTUB478433:GH4Y-3844-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: KZN 4207Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: KZN 4207Imported.

    Entry informationi

    Entry nameiI1SC38_MYCTX
    AccessioniPrimary (citable) accession number: I1SC38
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3