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I1SC38

- I1SC38_MYCTX

UniProt

I1SC38 - I1SC38_MYCTX

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Protein
Submitted name:

ATP-dependent DNA ligase LigC

Gene

TBSG_03799

Organism
Mycobacterium tuberculosis KZN 4207
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMTUB478433:GH4Y-3844-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase LigCImported
Submitted name:
ATP-dependent DNA ligase ligCImported
Gene namesi
ORF Names:TBSG_03799Imported, V459_03572Imported
OrganismiMycobacterium tuberculosis KZN 4207Imported
Taxonomic identifieri478433 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
ProteomesiUP000005217: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I1SC38-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MQLPVMPPVS PMLAKSVTAI PPDASYEPKW DGFRSICFRD GDQVELGSRN
60 70 80 90 100
ERPMTRYFPE LVAAIRAELP HRCVIDGEII IATDHGLDFE ALQQRIHPAE
110 120 130 140 150
SRVRMLADRT PASFIAFDLL ALGDDDYTGR PFSERRAALV DAVTGSGADA
160 170 180 190 200
DLSIHVTPAT TDMATAQRWF SEFEGAGLDG VIAKPPHITY QPDKRVMFKI
210 220 230 240 250
KHLRTADCVV AGYRVHKSGS DAIGSLLLGL YQEDGQLASV GVIGAFPMAE
260 270 280 290 300
RRRLLTELQP LVTSFDDHPW NWAAHVAGQR TPRKNEFSRW NVGKDLSFVP
310 320 330 340 350
LRPERVVEVR YDHMEGARFR HTAQFNRWRP DRDPRSCSYA QLERPLTVSL

SDIVPGLR
Length:358
Mass (Da):40,141
Last modified:June 13, 2012 - v1
Checksum:i22DA33D1A56196BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001662 Genomic DNA. Translation: AEB05928.1.
JLCP01000011 Genomic DNA. Translation: KBM94998.1.
RefSeqiYP_005102267.1. NC_016768.1.

Genome annotation databases

EnsemblBacteriaiAEB05928; AEB05928; TBSG_03799.
GeneIDi11695782.
KEGGimtk:TBSG_03799.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001662 Genomic DNA. Translation: AEB05928.1 .
JLCP01000011 Genomic DNA. Translation: KBM94998.1 .
RefSeqi YP_005102267.1. NC_016768.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEB05928 ; AEB05928 ; TBSG_03799 .
GeneIDi 11695782.
KEGGi mtk:TBSG_03799.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.

Enzyme and pathway databases

BioCyci MTUB478433:GH4Y-3844-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KZN 4207Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KZN 4207Imported.

Entry informationi

Entry nameiI1SC38_MYCTX
AccessioniPrimary (citable) accession number: I1SC38
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: November 26, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3