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I1SC38 (I1SC38_MYCTX) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

ATP-dependent DNA ligase ligC EMBL AEB05928.1
Gene names
ORF Names:TBSG_03799 EMBL AEB05928.1, V459_03572 EMBL KBM94998.1
OrganismMycobacterium tuberculosis KZN 4207 [Complete proteome] EMBL AEB05928.1
Taxonomic identifier478433 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex

Protein attributes

Sequence length358 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEB05928.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I1SC38 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 22DA33D1A56196BD

FASTA35840,141
        10         20         30         40         50         60 
MQLPVMPPVS PMLAKSVTAI PPDASYEPKW DGFRSICFRD GDQVELGSRN ERPMTRYFPE 

        70         80         90        100        110        120 
LVAAIRAELP HRCVIDGEII IATDHGLDFE ALQQRIHPAE SRVRMLADRT PASFIAFDLL 

       130        140        150        160        170        180 
ALGDDDYTGR PFSERRAALV DAVTGSGADA DLSIHVTPAT TDMATAQRWF SEFEGAGLDG 

       190        200        210        220        230        240 
VIAKPPHITY QPDKRVMFKI KHLRTADCVV AGYRVHKSGS DAIGSLLLGL YQEDGQLASV 

       250        260        270        280        290        300 
GVIGAFPMAE RRRLLTELQP LVTSFDDHPW NWAAHVAGQR TPRKNEFSRW NVGKDLSFVP 

       310        320        330        340        350 
LRPERVVEVR YDHMEGARFR HTAQFNRWRP DRDPRSCSYA QLERPLTVSL SDIVPGLR 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001662 Genomic DNA. Translation: AEB05928.1.
JLCP01000011 Genomic DNA. Translation: KBM94998.1.
RefSeqYP_005102267.1. NC_016768.1.

3D structure databases

ProteinModelPortalI1SC38.
SMRI1SC38. Positions 6-340.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB05928; AEB05928; TBSG_03799.
GeneID11695782.
KEGGmtk:TBSG_03799.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222508.
KOK01971.

Enzyme and pathway databases

BioCycMTUB478433:GH4Y-3844-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI1SC38_MYCTX
AccessionPrimary (citable) accession number: I1SC38
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: July 9, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)