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I1SC38

- I1SC38_MYCTX

UniProt

I1SC38 - I1SC38_MYCTX

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Protein
Submitted name:

ATP-dependent DNA ligase LigC

Gene
TBSG_03799, V459_03572
Organism
Mycobacterium tuberculosis KZN 4207
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMTUB478433:GH4Y-3844-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase LigCImported
Submitted name:
ATP-dependent DNA ligase ligCImported
Gene namesi
ORF Names:TBSG_03799Imported, V459_03572Imported
OrganismiMycobacterium tuberculosis KZN 4207Imported
Taxonomic identifieri478433 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
ProteomesiUP000005217: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I1SC38-1 [UniParc]FASTAAdd to Basket

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MQLPVMPPVS PMLAKSVTAI PPDASYEPKW DGFRSICFRD GDQVELGSRN    50
ERPMTRYFPE LVAAIRAELP HRCVIDGEII IATDHGLDFE ALQQRIHPAE 100
SRVRMLADRT PASFIAFDLL ALGDDDYTGR PFSERRAALV DAVTGSGADA 150
DLSIHVTPAT TDMATAQRWF SEFEGAGLDG VIAKPPHITY QPDKRVMFKI 200
KHLRTADCVV AGYRVHKSGS DAIGSLLLGL YQEDGQLASV GVIGAFPMAE 250
RRRLLTELQP LVTSFDDHPW NWAAHVAGQR TPRKNEFSRW NVGKDLSFVP 300
LRPERVVEVR YDHMEGARFR HTAQFNRWRP DRDPRSCSYA QLERPLTVSL 350
SDIVPGLR 358
Length:358
Mass (Da):40,141
Last modified:June 13, 2012 - v1
Checksum:i22DA33D1A56196BD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001662 Genomic DNA. Translation: AEB05928.1.
JLCP01000011 Genomic DNA. Translation: KBM94998.1.
RefSeqiYP_005102267.1. NC_016768.1.

Genome annotation databases

EnsemblBacteriaiAEB05928; AEB05928; TBSG_03799.
GeneIDi11695782.
KEGGimtk:TBSG_03799.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001662 Genomic DNA. Translation: AEB05928.1 .
JLCP01000011 Genomic DNA. Translation: KBM94998.1 .
RefSeqi YP_005102267.1. NC_016768.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEB05928 ; AEB05928 ; TBSG_03799 .
GeneIDi 11695782.
KEGGi mtk:TBSG_03799.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.

Enzyme and pathway databases

BioCyci MTUB478433:GH4Y-3844-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KZN 4207Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KZN 4207Imported.

Entry informationi

Entry nameiI1SC38_MYCTX
AccessioniPrimary (citable) accession number: I1SC38
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: September 3, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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