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I1RSJ3 (I1RSJ3_GIBZE) Unreviewed, UniProtKB/TrEMBL

Last modified November 28, 2012. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1028 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix SAAS SAAS004837
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtransmembrane transport

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I1RSJ3 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 80A490DCE1AA2FC3

FASTA1,028111,274
        10         20         30         40         50         60 
MTNIIPRRLA CPNDDIDRRR NTAPERFLRG SRLKSRPFYT TVFLLSILTA YSFLSHTTFA 

        70         80         90        100        110        120 
QSGSNHAADP HHLFKRSSST DTPECNQVHD AQDKCAFVRK YCTDDDAGLV PYIELYYCAF 

       130        140        150        160        170        180 
GNVRPIAFSI LVAWLGLLFT TIGIAASDFF SVNLSTIATV LGLSESLAGV TFLAFGNGSP 

       190        200        210        220        230        240 
DVFSTFAAMG SNSASMAVGE LIGAASFITG VVAGSMALVR EFRVDRKTYT RDICFFIFAV 

       250        260        270        280        290        300 
VFTMIFLADG HLHLWECWAM IGYYAVYVVT VVTWHWCSTR RKARQRREGE ARSHVYHSGD 

       310        320        330        340        350        360 
ELAGEPYRDD VDDVGSAPGT AVSTPPDISL LEAGPRIEVE GTPQLDESDM SSEDHDRMVA 

       370        380        390        400        410        420 
AEVNSSMRVL RGRGTRRNTM TPIRPSLVGA LEFRSALAQL QREGNLQLST IPGRSYSDYH 

       430        440        450        460        470        480 
IHRRRQTTAT ISDAARSDGR PASGHDGHAP RRNRALSSGD QPVGTASHSD LRIPSRDRGE 

       490        500        510        520        530        540 
SSLSVPGSTA SGTRASSPSP SHTVGGNLAA PLVGPSGTTF DAPSESVRGQ IPTPELHLQI 

       550        560        570        580        590        600 
PSPSRRSSCS DRSSPNQPFP MYTDSPALLT PNYHNDPVEF FVSPGGVSPS TVVPGLGGRE 

       610        620        630        640        650        660 
TPFADLQLTV DVPSRPVRWW PYAVLPPPHI VLATLFPTLQ GWKEKTAWDK LVSAISVPSI 

       670        680        690        700        710        720 
FLLVITLPVV DSATTDGESS FLETIVDLAN SHHGIGHMAP PVSVEHSSIE PEGETEWERY 

       730        740        750        760        770        780 
RRCSHVSQGS SYLGSAVPPS SAHAAGGEYS TAPHLSLGPP AIVTKPASDF PSSSSARGDC 

       790        800        810        820        830        840 
TGWNRWLVAL QLFTGPQFAV LVLWANTLED QESPHKTLIR MVLYTLLASL ILLGGLIVFT 

       850        860        870        880        890        900 
LEDRPPRYHY MLCFMGFIIS IAWISTIAGE VVGVLKTVGV ILNISEALLG LTIFAAGNSV 

       910        920        930        940        950        960 
GDLVADITVA RLGYPVMALS ACFGGPMLNI LLGIGIGGVM MMVKKANKKH HKNPSLPIKY 

       970        980        990       1000       1010       1020 
KPYRIQVNGT LMISAITLLV TLVGLLIVVP MNKWILSRKI GWGLITLWAV STVVNVIIEV 


TGAWGEVA 

« Hide

References

« Hide 'large scale' references
[1]"The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization."
Cuomo C.A., Gueldener U., Xu J.-R., Trail F., Turgeon B.G., Di Pietro A., Walton J.D., Ma L.-J., Baker S.E., Rep M., Adam G., Antoniw J., Baldwin T., Calvo S.E., Chang Y.-L., DeCaprio D., Gale L.R., Gnerre S. expand/collapse author list , Goswami R.S., Hammond-Kosack K., Harris L.J., Hilburn K., Kennell J.C., Kroken S., Magnuson J.K., Mannhaupt G., Mauceli E.W., Mewes H.-W., Mitterbauer R., Muehlbauer G., Muensterkoetter M., Nelson D., O'Donnell K., Ouellet T., Qi W., Quesneville H., Roncero M.I.G., Seong K.-Y., Tetko I.V., Urban M., Waalwijk C., Ward T.J., Yao J., Birren B.W., Kistler H.C.
Science 317:1400-1402(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084 EnsemblFungi FGSG_07114P0.
[2]"Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium."
Ma L.-J., van der Does H.C., Borkovich K.A., Coleman J.J., Daboussi M.-J., Di Pietro A., Dufresne M., Freitag M., Grabherr M., Henrissat B., Houterman P.M., Kang S., Shim W.-B., Woloshuk C., Xie X., Xu J.-R., Antoniw J., Baker S.E. expand/collapse author list , Bluhm B.H., Breakspear A., Brown D.W., Butchko R.A.E., Chapman S., Coulson R., Coutinho P.M., Danchin E.G.J., Diener A., Gale L.R., Gardiner D.M., Goff S., Hammond-Kosack K.E., Hilburn K., Hua-Van A., Jonkers W., Kazan K., Kodira C.D., Koehrsen M., Kumar L., Lee Y.-H., Li L., Manners J.M., Miranda-Saavedra D., Mukherjee M., Park G., Park J., Park S.-Y., Proctor R.H., Regev A., Ruiz-Roldan M.C., Sain D., Sakthikumar S., Sykes S., Schwartz D.C., Turgeon B.G., Wapinski I., Yoder O., Young S., Zeng Q., Zhou S., Galagan J., Cuomo C.A., Kistler H.C., Rep M.
Nature 464:367-373(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084 EnsemblFungi FGSG_07114P0.
[3]EnsemblFungi
Submitted (OCT-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084 EnsemblFungi FGSG_07114P0.

Cross-references

Sequence databases

RefSeqXP_387290.1. XM_387290.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiFGSG_07114T0; FGSG_07114P0; FGSG_07114.
GeneID2789048.
KEGGfgr:FG07114.1.

Phylogenomic databases

KOK13754.

Family and domain databases

InterProIPR004837. NaCa_Exmemb.
[Graphical view]
PfamPF01699. Na_Ca_ex. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI1RSJ3_GIBZE
AccessionPrimary (citable) accession number: I1RSJ3
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: November 28, 2012
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)