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I1RHT5 (I1RHT5_GIBZE) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length317 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
I1RHT5 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 7451E1FD82A27AB9

FASTA31735,830
        10         20         30         40         50         60 
MSNGTNGTNG AEAQSKFDPN FTDHVIGLMS PETEPRQREI LTSLIRHMHD FCREVELKQE 

        70         80         90        100        110        120 
EWIIGVNYIN SLGQAYKKNR NETWRVCDIL GIESLVDEIN HKVVTEGGKA PTSSSILGPF 

       130        140        150        160        170        180 
WSPETPFRDL GGSVVQDMPK DGQLTFFHGV IRDVDTGKGI PNAVFDMWQA STNGKYDAHD 

       190        200        210        220        230        240 
PENQSRHNLR GKFRTDQDGK FWFYCLKPTE YAIDTSGPSA ELLRIMGRHP YRPAHIHIMV 

       250        260        270        280        290        300 
THDDYLGVTA QLYPSDDPYL ETDTACAVKD DLVLDFKPAK DDPKGATLDV EYNINLASKK 

       310 
YKPDNTMLMQ NANQDKF

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References

« Hide 'large scale' references
[1]"The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization."
Cuomo C.A., Gueldener U., Xu J.-R., Trail F., Turgeon B.G., Di Pietro A., Walton J.D., Ma L.-J., Baker S.E., Rep M., Adam G., Antoniw J., Baldwin T., Calvo S.E., Chang Y.-L., DeCaprio D., Gale L.R., Gnerre S. expand/collapse author list , Goswami R.S., Hammond-Kosack K., Harris L.J., Hilburn K., Kennell J.C., Kroken S., Magnuson J.K., Mannhaupt G., Mauceli E.W., Mewes H.-W., Mitterbauer R., Muehlbauer G., Muensterkoetter M., Nelson D., O'Donnell K., Ouellet T., Qi W., Quesneville H., Roncero M.I.G., Seong K.-Y., Tetko I.V., Urban M., Waalwijk C., Ward T.J., Yao J., Birren B.W., Kistler H.C.
Science 317:1400-1402(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084 EnsemblFungi FGSG_03349P0.
[2]"Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium."
Ma L.-J., van der Does H.C., Borkovich K.A., Coleman J.J., Daboussi M.-J., Di Pietro A., Dufresne M., Freitag M., Grabherr M., Henrissat B., Houterman P.M., Kang S., Shim W.-B., Woloshuk C., Xie X., Xu J.-R., Antoniw J., Baker S.E. expand/collapse author list , Bluhm B.H., Breakspear A., Brown D.W., Butchko R.A.E., Chapman S., Coulson R., Coutinho P.M., Danchin E.G.J., Diener A., Gale L.R., Gardiner D.M., Goff S., Hammond-Kosack K.E., Hilburn K., Hua-Van A., Jonkers W., Kazan K., Kodira C.D., Koehrsen M., Kumar L., Lee Y.-H., Li L., Manners J.M., Miranda-Saavedra D., Mukherjee M., Park G., Park J., Park S.-Y., Proctor R.H., Regev A., Ruiz-Roldan M.C., Sain D., Sakthikumar S., Sykes S., Schwartz D.C., Turgeon B.G., Wapinski I., Yoder O., Young S., Zeng Q., Zhou S., Galagan J., Cuomo C.A., Kistler H.C., Rep M.
Nature 464:367-373(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084 EnsemblFungi FGSG_03349P0.
[3]EnsemblFungi
Submitted (OCT-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084 EnsemblFungi FGSG_03349P0.

Cross-references

Sequence databases

RefSeqXP_383525.1. XM_383525.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiFGSG_03349T0; FGSG_03349P0; FGSG_03349.
GeneID2786073.
KEGGfgr:FG03349.1.

Phylogenomic databases

KOK03381.

Family and domain databases

Gene3D2.60.130.10. 1 hit.
InterProIPR007535. Catechol_dOase_N.
IPR000627. Intradiol_dOase_C.
IPR015889. Intradiol_dOase_core.
[Graphical view]
PfamPF00775. Dioxygenase_C. 1 hit.
PF04444. Dioxygenase_N. 1 hit.
[Graphical view]
SUPFAMSSF49482. Dioxygenase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI1RHT5_GIBZE
AccessionPrimary (citable) accession number: I1RHT5
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: March 6, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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