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Protein

Alpha-amylase

Gene

GLYMA_17G242400

Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei201NucleophileUniRule annotation1
Active sitei226Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:GLYMA_17G242400Imported
OrganismiGlycine max (Soybean) (Glycine hispida)Imported
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
Proteomesi
  • UP000008827 Componenti: Chromosome 17

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500876544024 – 414Alpha-amylaseSequence analysisAdd BLAST391

Interactioni

Protein-protein interaction databases

STRINGi3847.GLYMA17G36090.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 354AamyInterPro annotationAdd BLAST331
Domaini355 – 414Alpha-amyl_C2InterPro annotationAdd BLAST60

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG0471. Eukaryota.
COG0366. LUCA.
InParanoidiI1MXP2.
OMAiYLAMIDE.
OrthoDBiEOG093600FS.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

I1MXP2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTLSQLSLL CLCLSFFPLF ASPALLFQGF NWESSKKGGW YNSLKNTIPD
60 70 80 90 100
LANAGITHVW LPPPSQSVSP EGYLPGRLYD LDASKYGTKD QLKSLIAAFH
110 120 130 140 150
DKGIKCLADI VINHRTAERK DGRGIYCIFE GGTPDARLDW GPSFICKDDN
160 170 180 190 200
TYSDGTGNLD SGEPYDPAPD IDHLNPQVQR ELSEWMNWLK TEIGFDGWRF
210 220 230 240 250
DYVKGYAPSI TKIYMEQTRP DFAVGEKWDS LSIDNYDGHR GALVNWVESA
260 270 280 290 300
GGAITAFDFT TKGILQAAVQ GQLWRLKDSN GKPSGMIGVK PENAVTFIDN
310 320 330 340 350
HDTGSTQRIW PFPSDKVMQG YAYILTHPGT PSIFYDHFFD WGLKEQIAKL
360 370 380 390 400
SSIRVKHGIN EKSSVNILAA EADLYVAKID NKIFLKIGPK MDLGNLIPPN
410
FHVATSGQDY AVWE
Length:414
Mass (Da):46,147
Last modified:June 13, 2012 - v1
Checksum:i6B2A04694A0536DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000850 Genomic DNA. Translation: KRH05687.1.
RefSeqiXP_003550340.1. XM_003550292.3.
UniGeneiGma.39899.

Genome annotation databases

EnsemblPlantsiGLYMA17G36090.1; GLYMA17G36090.1; GLYMA17G36090.
GeneIDi100815664.
GrameneiGLYMA17G36090.1; GLYMA17G36090.1; GLYMA17G36090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000850 Genomic DNA. Translation: KRH05687.1.
RefSeqiXP_003550340.1. XM_003550292.3.
UniGeneiGma.39899.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3847.GLYMA17G36090.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiGLYMA17G36090.1; GLYMA17G36090.1; GLYMA17G36090.
GeneIDi100815664.
GrameneiGLYMA17G36090.1; GLYMA17G36090.1; GLYMA17G36090.

Phylogenomic databases

eggNOGiKOG0471. Eukaryota.
COG0366. LUCA.
InParanoidiI1MXP2.
OMAiYLAMIDE.
OrthoDBiEOG093600FS.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiI1MXP2_SOYBN
AccessioniPrimary (citable) accession number: I1MXP2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: November 30, 2016
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.