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Protein

Alpha-amylase

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei201 – 2011NucleophileUniRule annotation
Active sitei226 – 2261Proton donorUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
OrganismiGlycine max (Soybean) (Glycine hispida)Imported
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
ProteomesiUP000008827 Componenti: Chromosome 17

PTM / Processingi

Proteomic databases

PRIDEiI1MXP2.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

InParanoidiI1MXP2.
KOiK01176.
OMAiLSEWMNW.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

I1MXP2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTLSQLSLL CLCLSFFPLF ASPALLFQGF NWESSKKGGW YNSLKNTIPD
60 70 80 90 100
LANAGITHVW LPPPSQSVSP EGYLPGRLYD LDASKYGTKD QLKSLIAAFH
110 120 130 140 150
DKGIKCLADI VINHRTAERK DGRGIYCIFE GGTPDARLDW GPSFICKDDN
160 170 180 190 200
TYSDGTGNLD SGEPYDPAPD IDHLNPQVQR ELSEWMNWLK TEIGFDGWRF
210 220 230 240 250
DYVKGYAPSI TKIYMEQTRP DFAVGEKWDS LSIDNYDGHR GALVNWVESA
260 270 280 290 300
GGAITAFDFT TKGILQAAVQ GQLWRLKDSN GKPSGMIGVK PENAVTFIDN
310 320 330 340 350
HDTGSTQRIW PFPSDKVMQG YAYILTHPGT PSIFYDHFFD WGLKEQIAKL
360 370 380 390 400
SSIRVKHGIN EKSSVNILAA EADLYVAKID NKIFLKIGPK MDLGNLIPPN
410
FHVATSGQDY AVWE
Length:414
Mass (Da):46,147
Last modified:June 13, 2012 - v1
Checksum:i6B2A04694A0536DC
GO

Sequence databases

RefSeqiXP_003550340.1. XM_003550292.2.
UniGeneiGma.39899.

Genome annotation databases

EnsemblPlantsiGLYMA17G36090.1; GLYMA17G36090.1; GLYMA17G36090.
GeneIDi100815664.
KEGGigmx:100815664.

Cross-referencesi

Sequence databases

RefSeqiXP_003550340.1. XM_003550292.2.
UniGeneiGma.39899.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiI1MXP2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiGLYMA17G36090.1; GLYMA17G36090.1; GLYMA17G36090.
GeneIDi100815664.
KEGGigmx:100815664.

Phylogenomic databases

InParanoidiI1MXP2.
KOiK01176.
OMAiLSEWMNW.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Williams 82Imported.
  2. EnsemblPlants
    Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: IDENTIFICATION.
    Strain: Williams 82Imported.

Entry informationi

Entry nameiI1MXP2_SOYBN
AccessioniPrimary (citable) accession number: I1MXP2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: April 1, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.