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Protein

Glutamate decarboxylase

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
OrganismiGlycine max (Soybean) (Glycine hispida)Imported
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
ProteomesiUP000008827 Componenti: Chromosome 16

PTM / Processingi

Proteomic databases

PRIDEiI1MQM4.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiI1MQM4.
KOiK01580.
OMAiSSKHTVF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

I1MQM4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLTSTATHP DEQDQSLNYT FASRYVREPI PKFKMPEKSI PKDAAYQIIN
60 70 80 90 100
DELMLDGAPR LNLASFVTTW MEPECDKLIM ASLNKNYVDM DEYPVTTELQ
110 120 130 140 150
NRCVNIIANL FHAPISDDET AVGVGTVGSS EAIMLAGLAF KRKWQTKRKA
160 170 180 190 200
EGKPYDKPNI VTGANVQVCW EKFARYFEVE LKEVKLKEGY YVMDPAKAVE
210 220 230 240 250
MVDENTICVA AILGSTMTGE FEDVKLLDEL LTKKNNETGW DTPIHVDAAS
260 270 280 290 300
GGFIAPFLYP DLEWDFRLPL VKSINVSGHK YGLVYPGVGW VVWRSKDDLP
310 320 330 340 350
DELVFHINYL GSDQPTFTLN FSKGSSQIIA QYYQLIRLGF EGYKNIMENC
360 370 380 390 400
WENARVLKEG IERTGRFNII SKDIGVPLVA FSLKDSSQHT VFEIADHLRK
410 420 430 440 450
FGWIVPAYTM PPDAQHIAVL RVVIREDFSR GLAERLAADI EKVVKLLDTL
460 470 480 490
PSPLTTKAVH ITAITSETGE KIKKAAIETQ KEIAFYWKRL VDGKRLGAC
Length:499
Mass (Da):56,267
Last modified:June 13, 2012 - v1
Checksum:iBE32642BF22AE9C5
GO

Sequence databases

RefSeqiXP_003548319.1. XM_003548271.2.

Genome annotation databases

EnsemblPlantsiGLYMA16G34450.1; GLYMA16G34450.1; GLYMA16G34450.
GeneIDi100783047.
KEGGigmx:100783047.

Cross-referencesi

Sequence databases

RefSeqiXP_003548319.1. XM_003548271.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiI1MQM4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiGLYMA16G34450.1; GLYMA16G34450.1; GLYMA16G34450.
GeneIDi100783047.
KEGGigmx:100783047.

Phylogenomic databases

InParanoidiI1MQM4.
KOiK01580.
OMAiSSKHTVF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Williams 82Imported.
  2. EnsemblPlants
    Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: IDENTIFICATION.
    Strain: Williams 82Imported.

Entry informationi

Entry nameiI1MQM4_SOYBN
AccessioniPrimary (citable) accession number: I1MQM4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: April 1, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.