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Protein

Glutamate decarboxylase

Gene

GLYMA_08G091400

Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:GLYMA_08G091400Imported
OrganismiGlycine max (Soybean) (Glycine hispida)Imported
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
Proteomesi
  • UP000008827 Componenti: Chromosome 8

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei277N6-(pyridoxal phosphate)lysineUniRule annotation1

Interactioni

Protein-protein interaction databases

STRINGi3847.GLYMA08G09660.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1383. Eukaryota.
COG0076. LUCA.
InParanoidiI1KRN3.
KOiK01580.
OrthoDBiEOG093607ZR.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

I1KRN3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVFPKPASES DLFLHSNFAS RYARDSLPRF SIPEDSMPKE AAYQNIHDEL
60 70 80 90 100
QLDAIPKLNL ASFVTTSMEE ECNKLIMESI NKNYVDMDEY PITTDLHNRC
110 120 130 140 150
VNMIARLFHA EIGENEIATG AGTVGSSEAI MLAGLAFKKK WQNKRKEEGK
160 170 180 190 200
PYDKPNLVTG SNVQVCWEKF ARYFEVELRE VEVREGYYVM DPAKAVEMVD
210 220 230 240 250
ENTICVAAIL GSTYNGEFED VKLLNDLLLE KNKQTGWDTP IHVDAASGGF
260 270 280 290 300
IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RTKDDLPEDL
310 320 330 340 350
VFHINYLGAD QPTFTLNFSK GSSQIIAQYY QLIRLGQEGY RSIMENCREN
360 370 380 390 400
AMVLKEDLEK SGHFNILSKD DGVPVVAFSL KDRSRYDEFK ISEMLRRHGW
410 420 430 440 450
IVPAYPMPPA AQHINVLRVV IRAEFSRTLA ERLAFDIHNV MDELEKLHPP
460 470 480 490
IVTKNTKEEN KAMVENGVKN TALDAHREII AQESNKRQKI MAA
Length:493
Mass (Da):56,167
Last modified:June 13, 2012 - v1
Checksum:iFCD2A14E29147F16
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000841 Genomic DNA. Translation: KRH42467.1.
RefSeqiXP_003531122.1. XM_003531074.3.

Genome annotation databases

EnsemblPlantsiGLYMA08G09660.1; GLYMA08G09660.1; GLYMA08G09660.
GeneIDi100781791.
GrameneiGLYMA08G09660.1; GLYMA08G09660.1; GLYMA08G09660.
KEGGigmx:100781791.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000841 Genomic DNA. Translation: KRH42467.1.
RefSeqiXP_003531122.1. XM_003531074.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3847.GLYMA08G09660.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiGLYMA08G09660.1; GLYMA08G09660.1; GLYMA08G09660.
GeneIDi100781791.
GrameneiGLYMA08G09660.1; GLYMA08G09660.1; GLYMA08G09660.
KEGGigmx:100781791.

Phylogenomic databases

eggNOGiKOG1383. Eukaryota.
COG0076. LUCA.
InParanoidiI1KRN3.
KOiK01580.
OrthoDBiEOG093607ZR.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiI1KRN3_SOYBN
AccessioniPrimary (citable) accession number: I1KRN3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: November 30, 2016
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.