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Protein

Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

Gene

100802169

Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).UniRule annotation

Catalytic activityi

Succinate + a quinone = fumarate + a quinol.UniRule annotation

Cofactori

FADUniRule annotation

Pathwayi: tricarboxylic acid cycle

This protein is involved in step 1 of the subpathway that synthesizes fumarate from succinate (eukaryal route).UniRule annotation
Proteins known to be involved in this subpathway in this organism are:
  1. Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (100802169), Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (100803020), Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (100815377), Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (100803020), Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (100818379), Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (100818379), Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (100803020), Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (GLYMA_16G066200)
This subpathway is part of the pathway tricarboxylic acid cycle, which is itself part of Carbohydrate metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes fumarate from succinate (eukaryal route), the pathway tricarboxylic acid cycle and in Carbohydrate metabolism.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
Biological processElectron transportUniRule annotation, Transport, Tricarboxylic acid cycleUniRule annotation
LigandFADUniRule annotation, Flavoprotein

Enzyme and pathway databases

UniPathwayiUPA00223; UER01006

Names & Taxonomyi

Protein namesi
Recommended name:
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrialUniRule annotation (EC:1.3.5.1UniRule annotation)
Gene namesi
Name:100802169Imported
ORF Names:GLYMA_02G057400Imported
OrganismiGlycine max (Soybean) (Glycine hispida)Imported
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
Proteomesi
  • UP000008827 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

MembraneUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi3847.GLYMA02G06400.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini51 – 447FAD_binding_2InterPro annotationAdd BLAST397
Domaini502 – 634Succ_DH_flav_CInterPro annotationAdd BLAST133

Sequence similaritiesi

Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.UniRule annotation

Keywords - Domaini

Transit peptideUniRule annotation

Phylogenomic databases

KOiK00234
OMAiGDSPWEH
OrthoDBiEOG093604YT

Family and domain databases

Gene3Di3.50.50.60, 2 hits
3.90.700.10, 1 hit
InterProiView protein in InterPro
IPR003953 FAD-binding_2
IPR036188 FAD/NAD-bd_sf
IPR003952 FRD_SDH_FAD_BS
IPR037099 Fum_R/Succ_DH_flav-like_C_sf
IPR015939 Fum_Rdtase/Succ_DH_flav-like_C
IPR027477 Succ_DH/fumarate_Rdtase_cat_sf
IPR011281 Succ_DH_flav_su_fwd
IPR014006 Succ_Dhase_FrdA_Gneg
PfamiView protein in Pfam
PF00890 FAD_binding_2, 1 hit
PF02910 Succ_DH_flav_C, 1 hit
SUPFAMiSSF46977 SSF46977, 1 hit
SSF51905 SSF51905, 2 hits
SSF56425 SSF56425, 1 hit
TIGRFAMsiTIGR01816 sdhA_forward, 1 hit
TIGR01812 sdhA_frdA_Gneg, 1 hit
PROSITEiView protein in PROSITE
PS00504 FRD_SDH_FAD_BINDING, 1 hit

Sequencei

Sequence statusi: Complete.

I1JCQ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWRCVARAIR VPASERSIPN HQPLRSHISR FFSGGGGGGS SSYNVVDHKY
60 70 80 90 100
DAVVVGAGGA GLRAAIGLSE HGFNTACITK LFPTRSHTVA AQGGINAALG
110 120 130 140 150
NMTEDDWRWH MYDTVKGSDW LGDQDAIQYM CREAPKAVIE LENYGLPFSR
160 170 180 190 200
TEDGRIYQRA FGGQSLNFGK GGQAYRCACA ADRTGHALLH TLYGQAMRHN
210 220 230 240 250
TQFFVEYFAL DLLMNSDGTC QGVIALNMED GTLHHFQASS TILATGGYGR
260 270 280 290 300
AYFSATSAHT CTGDGNAMVA RAGIPLEDLE FVQFHPTGIY GAGCLITEGS
310 320 330 340 350
RGEGGILRNS EGERFMERYA PTAKDLASRD VVSRSMTMEI REGRGVGPLK
360 370 380 390 400
DHIYLHLNHL PPDVLKERLP GISETAAIFA GVDVTKEPIP VLPTVHYNMG
410 420 430 440 450
GIPTNHHGEV ITIKGDDPDA VVPGLMAAGE TACASVHGAN RLGANSLLDI
460 470 480 490 500
VVFGRACANR VSEIQRPGEK QKPLEKDAGM KTIAWLDKLR NSNGSLPTSK
510 520 530 540 550
IRLNMQRIMQ NNAAVFRTQE TLEEGCQLID KAWESFHDVK LKDRSLIWNS
560 570 580 590 600
DLIETIELEN LLINACITMH SAEARKESRG AHAREDFTKR DDEKWMKHTL
610 620 630
GYWDNEKVRL DYRPVHMNTL DDEVESFPPK ARVY
Length:634
Mass (Da):69,762
Last modified:June 13, 2012 - v1
Checksum:i3D0F9776056DB9CA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACUP02000736 Genomic DNA No translation available.
ACUP02000737 Genomic DNA No translation available.
CM000835 Genomic DNA Translation: KRH69929.1
RefSeqiXP_003518027.1, XM_003517979.3

Genome annotation databases

EnsemblPlantsiKRH69929; KRH69929; GLYMA_02G057400
GeneIDi100802169
GrameneiKRH69929; KRH69929; GLYMA_02G057400
KEGGigmx:100802169

Similar proteinsi

Entry informationi

Entry nameiI1JCQ7_SOYBN
AccessioniPrimary (citable) accession number: I1JCQ7
Entry historyiIntegrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: May 23, 2018
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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