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I1IY84 (I1IY84_BRADI) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length501 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000382
   Molecular functionLyase RuleBase RU000382
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processglutamate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentplasmodesma

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionglutamate decarboxylase activity

Inferred from electronic annotation. Source: InterPro

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I1IY84 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: DC81E212534F1614

FASTA50155,481
        10         20         30         40         50         60 
MVLAHVQSDE AAASAAVFAS RYVQEPIPSF ELGEKSISKD AAYQIIHDEL LLDGSPRLNL 

        70         80         90        100        110        120 
ASFVTTWMEP ECDRLIIEGM NKNYADMDEY PVTTELQNRC VNIIARLFNA PLGAAETAVG 

       130        140        150        160        170        180 
VGTVGSSEAI MLAGLAFKRR WHNRRKAAGK PHDKPNIVTG ANVQVCWEKF ARYFEVELKE 

       190        200        210        220        230        240 
VKLSEGCYVM DPDKAVEMVD ENTICVAAIL GSTLTGEFED VKRLNGLLAA KNKRTGWDTP 

       250        260        270        280        290        300 
IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYPGVGWVVW RNKEDLPEEL 

       310        320        330        340        350        360 
IFHINYLGAD QPTFTLNFSK GSSQIIAQYY QFLRLGFEGY KNVMENCMES AKTLREGLLR 

       370        380        390        400        410        420 
TGRFDVISKE DGVPLVAFVF RGASARDGSL AFKLSASLRQ FGWIVPAYTM PADLEHMTVL 

       430        440        450        460        470        480 
RVVVREDFGR PLAERFLSNV RMALNELDLA DKGPVTKMRL TIELGPARGA DEEASVRVVE 

       490        500 
REAVSAHGSV SLVTGKTKGV C 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequencing and analysis of the model grass Brachypodium distachyon."
International Brachypodium Initiative
Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Bd21 EnsemblPlants BRADI5G11640.1.
[2]EnsemblPlants
Submitted (NOV-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: cv. Bd21 EnsemblPlants BRADI5G11640.1.

Cross-references

Sequence databases

RefSeqXP_003579852.1. XM_003579804.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsBRADI5G11640.1; BRADI5G11640.1; BRADI5G11640.
GeneID100832399.
KEGGbdi:100832399.

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI1IY84_BRADI
AccessionPrimary (citable) accession number: I1IY84
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: March 19, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)