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I1IY84

- I1IY84_BRADI

UniProt

I1IY84 - I1IY84_BRADI

Protein

Glutamate decarboxylase

Gene

BRADI5G11640

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 11 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Name:BRADI5G11640Imported
    OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
    Taxonomic identifieri15368 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeBrachypodieaeBrachypodium
    ProteomesiUP000008810: Chromosome 5

    Subcellular locationi

    GO - Cellular componenti

    1. plasmodesma Source: EnsemblPlants/Gramene

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I1IY84-1 [UniParc]FASTAAdd to Basket

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    MVLAHVQSDE AAASAAVFAS RYVQEPIPSF ELGEKSISKD AAYQIIHDEL    50
    LLDGSPRLNL ASFVTTWMEP ECDRLIIEGM NKNYADMDEY PVTTELQNRC 100
    VNIIARLFNA PLGAAETAVG VGTVGSSEAI MLAGLAFKRR WHNRRKAAGK 150
    PHDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGCYVM DPDKAVEMVD 200
    ENTICVAAIL GSTLTGEFED VKRLNGLLAA KNKRTGWDTP IHVDAASGGF 250
    IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYPGVGWVVW RNKEDLPEEL 300
    IFHINYLGAD QPTFTLNFSK GSSQIIAQYY QFLRLGFEGY KNVMENCMES 350
    AKTLREGLLR TGRFDVISKE DGVPLVAFVF RGASARDGSL AFKLSASLRQ 400
    FGWIVPAYTM PADLEHMTVL RVVVREDFGR PLAERFLSNV RMALNELDLA 450
    DKGPVTKMRL TIELGPARGA DEEASVRVVE REAVSAHGSV SLVTGKTKGV 500
    C 501
    Length:501
    Mass (Da):55,481
    Last modified:June 13, 2012 - v1
    Checksum:iDC81E212534F1614
    GO

    Sequence databases

    RefSeqiXP_003579852.1. XM_003579804.1.

    Genome annotation databases

    EnsemblPlantsiBRADI5G11640.1; BRADI5G11640.1; BRADI5G11640.
    GeneIDi100832399.
    KEGGibdi:100832399.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_003579852.1. XM_003579804.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi BRADI5G11640.1 ; BRADI5G11640.1 ; BRADI5G11640 .
    GeneIDi 100832399.
    KEGGi bdi:100832399.

    Phylogenomic databases

    KOi K01580.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
      International Brachypodium Initiative
      Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Bd21Imported.
    2. EnsemblPlants
      Submitted (NOV-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: cv. Bd21Imported.

    Entry informationi

    Entry nameiI1IY84_BRADI
    AccessioniPrimary (citable) accession number: I1IY84
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 11 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3