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Protein

Glutamate decarboxylase

Gene

BRADI5G11600

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Name:BRADI5G11600Imported
OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
Taxonomic identifieri15368 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeBrachypodieaeBrachypodium
ProteomesiUP000008810 Componenti: Chromosome 5

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiI1IY80.
KOiK01580.
OMAiFAREPIS.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

I1IY80-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALSRAQTNH GESLISSTFA SRYVRAALPR FKIPEQSIPK EAAYQIINDE
60 70 80 90 100
LMLDGNPRLN LASFVTTWME PECDKLIQNS INKNYVDMDE YPVTTELQNR
110 120 130 140 150
CVNMIAHLFN APIGDDETAV GVGTVGSSEA IMLAGLAFKR KWQNKMKAAG
160 170 180 190 200
KPFDKPNIVT GANVQVCWEK FARYFEVELK EVKLREGYYV MDPEKAVELV
210 220 230 240 250
DENTICVAAI LGSTLNGEFE DVKMLNDLLV AKNAETGWDT PIHVDAASGG
260 270 280 290 300
FIAPFIYPEL EWDFRLPLVK SINVSGHKYG LVYAGVGWVV WRTKDDLPDE
310 320 330 340 350
LIFHINYLGA DQPTFTLNFS KGSSQIIAQY YQLIRLGFEG YKDIMQNCRD
360 370 380 390 400
NATVLREGID KMGYFDIASK DSGVPLVAFS LKDSSRYTVF EVVESLRRFG
410 420 430 440 450
WIVPAYTMPA DAEHIAVMRV VIREDFSRGL AERLITDLNK VMGEMDTHAK
460 470 480
KHVAAEPPVA KKTVHEIEKE VATYWRRLVD RKKSSLVC
Length:488
Mass (Da):54,995
Last modified:June 13, 2012 - v1
Checksum:i7F2A8720C91974CA
GO

Sequence databases

RefSeqiXP_003579849.1. XM_003579801.2.

Genome annotation databases

EnsemblPlantsiBRADI5G11600.1; BRADI5G11600.1; BRADI5G11600.
GeneIDi100831497.
KEGGibdi:100831497.

Cross-referencesi

Sequence databases

RefSeqiXP_003579849.1. XM_003579801.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiBRADI5G11600.1; BRADI5G11600.1; BRADI5G11600.
GeneIDi100831497.
KEGGibdi:100831497.

Phylogenomic databases

InParanoidiI1IY80.
KOiK01580.
OMAiFAREPIS.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
    International Brachypodium Initiative
    Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Bd21Imported.
  2. EnsemblPlants
    Submitted (NOV-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: cv. Bd21Imported.

Entry informationi

Entry nameiI1IY80_BRADI
AccessioniPrimary (citable) accession number: I1IY80
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: February 4, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.