I1IXG2 (I1IXG2_BRADI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Histone deacetylase PIRNR PIRNR037913
EC=3.5.1.98 PIRNR PIRNR037913

Gene names

Name:

BRADI5G09190 EnsemblPlants BRADI5G09190.1

Organism

Brachypodium distachyon (Purple false brome) (Trachynia distachya) [Reference proteome] EnsemblPlants BRADI5G09190.1

Taxonomic identifier

15368 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › BEP clade › Pooideae › Brachypodieae › Brachypodium

Protein attributes

Sequence length	430 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of an N(6)-acetyl-lysine residue of a histone to yield a deacetylated histone. PIRNR PIRNR037913
Subcellular location	Nucleus By similarity PIRNR PIRNR037913.
Sequence similarities	Belongs to the histone deacetylase family. HD Type 1 subfamily. PIRNR PIRNR037913

Ontologies

Keywords
Biological process	Transcription Transcription regulation PIRNR PIRNR037913
Cellular component	Nucleus PIRNR PIRNR037913
Molecular function	Chromatin regulator PIRNR PIRNR037913 Hydrolase SAAS SAAS000286 PIRNR PIRNR037913
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	histone H3 deacetylation Inferred from electronic annotation. Source: GOC histone H4 deacetylation Inferred from electronic annotation. Source: GOC regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	NAD-dependent histone deacetylase activity (H3-K14 specific) Inferred from electronic annotation. Source: EC NAD-dependent histone deacetylase activity (H3-K18 specific) Inferred from electronic annotation. Source: EC NAD-dependent histone deacetylase activity (H3-K9 specific) Inferred from electronic annotation. Source: EC NAD-dependent histone deacetylase activity (H4-K16 specific) Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	I1IXG2 [UniParc]. Last modified June 13, 2012. Version 1. Checksum: C2491A7F9A6A19A5	FASTA	430	49,133
	10 20 30 40 50 60 MLEKDRISYF YDGDVGNVYF GPNHPMKPHR LCMTHHLVLS YGLHKKMEIY RPHKAYPTEL 70 80 90 100 110 120 AQFHSADYVE FLHRITPDTQ HLYASELTRY NLGEDCPVFD DLFEFCQIYA GGTLDAARRL 130 140 150 160 170 180 NHKTCDIAIN WAGGLHHAKK CEASGFCYIN DLVLGILELL KYHSRVLYID IDVHHGDGVE 190 200 210 220 230 240 EAFYFTDRVM TVSFHKYGDM FFPGTGDIKD IGDREGKYYA INIPLKDGID DTSFTRLFKT 250 260 270 280 290 300 IIAKVVETYL PGAIVLQCGA DSLARDRLGC FNLSIEGHAE CVKFVKKFKI PLLVTGGGGY 310 320 330 340 350 360 TKENVARCWA VETGVLLDTD LPNEIPDNEY IKYFGPDYTL KVPNLNMDNL NSKTYLSSIK 370 380 390 400 410 420 VQVMESLRAI QHAPGVQMQE VPPDFYIPDF DEDELDPDER VDQHTQDKQV HRDDEYYEGD 430 NDNDHDDGAH

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequencing and analysis of the model grass Brachypodium distachyon." International Brachypodium Initiative Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Bd21 EnsemblPlants BRADI5G09190.1.
[2]	EnsemblPlants Submitted (NOV-2012) to UniProtKB Cited for: IDENTIFICATION. Strain: cv. Bd21 EnsemblPlants BRADI5G09190.1.

Cross-references

Sequence databases
RefSeq	XP_003579685.1. XM_003579637.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	BRADI5G09190.1; BRADI5G09190.1; BRADI5G09190.
GeneID	100832825.
KEGG	bdi:100832825.
Phylogenomic databases
KO	K06067.
Family and domain databases
Gene3D	3.40.800.20. 1 hit.
InterPro	IPR000286. His_deacetylse. IPR003084. His_deacetylse_1. IPR023801. His_deacetylse_dom. [Graphical view]
PANTHER	PTHR10625. PTHR10625. 1 hit.
Pfam	PF00850. Hist_deacetyl. 1 hit. [Graphical view]
PIRSF	PIRSF037913. His_deacetylse_1. 1 hit.
PRINTS	PR01270. HDASUPER. PR01271. HISDACETLASE.
ProtoNet	Search...

Entry information

Entry name

I1IXG2_BRADI

Accession

Primary (citable) accession number: I1IXG2

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2012
Last sequence update:	June 13, 2012
Last modified:	March 6, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)