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Protein
Submitted name:

Uncharacterized protein

Gene

BRADI5G08230

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:BRADI5G08230Imported
OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
Taxonomic identifieri15368 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeBrachypodieaeBrachypodium
ProteomesiUP000008810 Componenti: Chromosome 5

Family & Domainsi

Phylogenomic databases

InParanoidiI1IX46.
KOiK00164.
OMAiEMYRHWR.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

I1IX46-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGWFRAASGL ARVALRRNLS RVPASPFAGP APRYFHSTRP RRFAAPEPRA
60 70 80 90 100
VPLSRLTDSF LDGTSSVYLE ELQRAWEADP NSVDESWDNF FRNFVGQAST
110 120 130 140 150
SPGISGQTIQ ESMRLLLLVR AYQVSGHLKA KLDPLGLEER PVPDVLDPAF
160 170 180 190 200
YGFSEADLDR EFFLGVWKMA GFLSDNRPVQ TLRSVVERLE QAYCGTIGYE
210 220 230 240 250
YMHIPDREKC NWLRERIETV NPREYTYDRR QVMLDRLIWS TQFENFLAQK
260 270 280 290 300
WTTAKRFGLE GAETLIPGMK EMFDRAADLG VESIVIGMPH RGRLNVLGNV
310 320 330 340 350
VRKPLRQIFS EFSGGTKPVN EGEGLYTGTG DVKYHLGTSY DRPTRGGKHI
360 370 380 390 400
HLSLVANPSH LEAVDPVVAG KTRAKQYYSN DLDRTKNLGV LLHGDGSFSG
410 420 430 440 450
QGVVYETLHL SALPNYSTGG TIHIVVNNQV AFTTDPLSGR SSQYCTDVAK
460 470 480 490 500
ALDAPIFHVN GDDLEAVVHT CELAAEWRQT FHSDVVVDIV CYRRFGHNEI
510 520 530 540 550
DEPSFTQPKM YKVIRNHPSA LEIYQKQMLE SGKLSKEDID KLHTKVNTIL
560 570 580 590 600
NEEFKKSKDD IPNKRDWLSA YWTGFKSPEQ ISRVRNTGVK PEILKRVGEA
610 620 630 640 650
MTTLPENFKP HRAVKKIFDL RRQMIETGEG IDWAVGEALA FATLIIEGNH
660 670 680 690 700
VRLSGQDVER GTFSHRHSVV HDQETGQHYC PLDNLVMNQN EELFTVSNSS
710 720 730 740 750
LSEFAVLGFE LGYSMENPNS LVLWEAQFGD FSNGAQVIFD QFISSGEAKW
760 770 780 790 800
LRQSGLVVCL PHGYDGQGPE HSSARMERFL QMSDDNPYVI PEMDSTTRKQ
810 820 830 840 850
IQQCNLQVVN VTTPANYFHV LRRQIHRDFR KPLIVMSPKN LLRHKECKSS
860 870 880 890 900
LSEFDDVAGH PGFDKQGTRF KRLIKDRNDH KDLEEGINRL VLCSGKVYYE
910 920 930 940 950
LDEERKKSDR NDVAICRVEQ LCPFPYDLIQ RELKRYPNAE IVWCQEEPMN
960 970 980 990 1000
MGAYTYINPR LLTAMRALGR GTIEDIKYAG RAPSAATATG FYSVHGQEQT
1010
ELVQKALQRD PIKCPF
Length:1,016
Mass (Da):115,333
Last modified:June 13, 2012 - v1
Checksum:i2F2C594950E2A97E
GO

Sequence databases

RefSeqiXP_003579622.1. XM_003579574.2.

Genome annotation databases

EnsemblPlantsiBRADI5G08230.1; BRADI5G08230.1; BRADI5G08230.
GeneIDi100838957.
KEGGibdi:100838957.

Cross-referencesi

Sequence databases

RefSeqiXP_003579622.1. XM_003579574.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiBRADI5G08230.1; BRADI5G08230.1; BRADI5G08230.
GeneIDi100838957.
KEGGibdi:100838957.

Phylogenomic databases

InParanoidiI1IX46.
KOiK00164.
OMAiEMYRHWR.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
    International Brachypodium Initiative
    Nature 463:763-768(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Bd21Imported.
  2. EnsemblPlants
    Submitted (OCT-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: cv. Bd21Imported.

Entry informationi

Entry nameiI1IX46_BRADI
AccessioniPrimary (citable) accession number: I1IX46
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: February 4, 2015
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.