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I1IX46

- I1IX46_BRADI

UniProt

I1IX46 - I1IX46_BRADI

Protein
Submitted name:

Uncharacterized protein

Gene

BRADI5G08230

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 7 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. cobalt ion binding Source: EnsemblPlants/Gramene
    2. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
    3. thiamine pyrophosphate binding Source: InterPro
    4. zinc ion binding Source: EnsemblPlants/Gramene

    GO - Biological processi

    1. response to cadmium ion Source: EnsemblPlants/Gramene
    2. tricarboxylic acid cycle Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:BRADI5G08230Imported
    OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
    Taxonomic identifieri15368 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeBrachypodieaeBrachypodium
    ProteomesiUP000008810: Chromosome 5

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrion Source: EnsemblPlants/Gramene

    Family & Domainsi

    Phylogenomic databases

    KOiK00164.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I1IX46-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGWFRAASGL ARVALRRNLS RVPASPFAGP APRYFHSTRP RRFAAPEPRA     50
    VPLSRLTDSF LDGTSSVYLE ELQRAWEADP NSVDESWDNF FRNFVGQAST 100
    SPGISGQTIQ ESMRLLLLVR AYQVSGHLKA KLDPLGLEER PVPDVLDPAF 150
    YGFSEADLDR EFFLGVWKMA GFLSDNRPVQ TLRSVVERLE QAYCGTIGYE 200
    YMHIPDREKC NWLRERIETV NPREYTYDRR QVMLDRLIWS TQFENFLAQK 250
    WTTAKRFGLE GAETLIPGMK EMFDRAADLG VESIVIGMPH RGRLNVLGNV 300
    VRKPLRQIFS EFSGGTKPVN EGEGLYTGTG DVKYHLGTSY DRPTRGGKHI 350
    HLSLVANPSH LEAVDPVVAG KTRAKQYYSN DLDRTKNLGV LLHGDGSFSG 400
    QGVVYETLHL SALPNYSTGG TIHIVVNNQV AFTTDPLSGR SSQYCTDVAK 450
    ALDAPIFHVN GDDLEAVVHT CELAAEWRQT FHSDVVVDIV CYRRFGHNEI 500
    DEPSFTQPKM YKVIRNHPSA LEIYQKQMLE SGKLSKEDID KLHTKVNTIL 550
    NEEFKKSKDD IPNKRDWLSA YWTGFKSPEQ ISRVRNTGVK PEILKRVGEA 600
    MTTLPENFKP HRAVKKIFDL RRQMIETGEG IDWAVGEALA FATLIIEGNH 650
    VRLSGQDVER GTFSHRHSVV HDQETGQHYC PLDNLVMNQN EELFTVSNSS 700
    LSEFAVLGFE LGYSMENPNS LVLWEAQFGD FSNGAQVIFD QFISSGEAKW 750
    LRQSGLVVCL PHGYDGQGPE HSSARMERFL QMSDDNPYVI PEMDSTTRKQ 800
    IQQCNLQVVN VTTPANYFHV LRRQIHRDFR KPLIVMSPKN LLRHKECKSS 850
    LSEFDDVAGH PGFDKQGTRF KRLIKDRNDH KDLEEGINRL VLCSGKVYYE 900
    LDEERKKSDR NDVAICRVEQ LCPFPYDLIQ RELKRYPNAE IVWCQEEPMN 950
    MGAYTYINPR LLTAMRALGR GTIEDIKYAG RAPSAATATG FYSVHGQEQT 1000
    ELVQKALQRD PIKCPF 1016
    Length:1,016
    Mass (Da):115,333
    Last modified:June 13, 2012 - v1
    Checksum:i2F2C594950E2A97E
    GO

    Sequence databases

    RefSeqiXP_003579622.1. XM_003579574.1.

    Genome annotation databases

    EnsemblPlantsiBRADI5G08230.1; BRADI5G08230.1; BRADI5G08230.
    GeneIDi100838957.
    KEGGibdi:100838957.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_003579622.1. XM_003579574.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi BRADI5G08230.1 ; BRADI5G08230.1 ; BRADI5G08230 .
    GeneIDi 100838957.
    KEGGi bdi:100838957.

    Phylogenomic databases

    KOi K00164.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
      International Brachypodium Initiative
      Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Bd21Imported.
    2. EnsemblPlants
      Submitted (NOV-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: cv. Bd21Imported.

    Entry informationi

    Entry nameiI1IX46_BRADI
    AccessioniPrimary (citable) accession number: I1IX46
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 7 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3