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Protein

Ribulose bisphosphate carboxylase small chain

Gene

LOC100825888

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.UniRule annotation

Catalytic activityi

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.UniRule annotationSAAS annotation
3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotationSAAS annotation, MonooxygenaseUniRule annotationSAAS annotation, Oxidoreductase
Biological processCarbon dioxide fixationUniRule annotationSAAS annotation, PhotorespirationUniRule annotationSAAS annotation, PhotosynthesisUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribulose bisphosphate carboxylase small chainUniRule annotation (EC:4.1.1.39UniRule annotation)
Gene namesi
Name:LOC100825888Imported
ORF Names:BRADI_5g04080v3Imported
OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
Taxonomic identifieri15368 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeBrachypodieaeBrachypodium
Proteomesi
  • UP000008810 Componenti: Chromosome 5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChloroplastSAAS annotation, Plastid

Expressioni

Gene expression databases

ExpressionAtlasiI1IWH6 baseline and differential

Interactioni

Subunit structurei

8 large chains + 8 small chains.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi15368.BRADI5G04080.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini59 – 167RuBisCO_smallInterPro annotationAdd BLAST109

Sequence similaritiesi

Belongs to the RuBisCO small chain family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IM2H Eukaryota
COG4451 LUCA
InParanoidiI1IWH6
KOiK01602
OMAiEVINTKH
OrthoDBiEOG09360OM1

Family and domain databases

Gene3Di3.30.190.10, 1 hit
InterProiView protein in InterPro
IPR024681 RuBisCO_sc
IPR000894 RuBisCO_sc_dom
IPR024680 RuBisCO_ssu_N
IPR036385 RuBisCO_ssu_sf
PfamiView protein in Pfam
PF12338 RbcS, 1 hit
PF00101 RuBisCO_small, 1 hit
PRINTSiPR00152 RUBISCOSMALL
SMARTiView protein in SMART
SM00961 RuBisCO_small, 1 hit
SUPFAMiSSF55239 SSF55239, 1 hit

Sequencei

Sequence statusi: Complete.

I1IWH6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPTVMASTA TSVAPFQGLK STAGLPVSRR NRSAAGLGSV SNGGRIRCMQ
60 70 80 90 100
VWPIEGIKKF ETLSYLPPLS VEALLKQIEY LIRSKWVPCL EFSKVGFVFR
110 120 130 140 150
EHARSPGYYD GRYWTMWKLP MFGCTDATQV LKELEEAKKE YPDAFIRIIG
160 170
FDNVRQVQCI SFIAYKPPGC QESGKA
Length:176
Mass (Da):19,694
Last modified:June 13, 2012 - v1
Checksum:i0F7B41712A1B5FF5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000884 Genomic DNA Translation: KQJ81957.1
RefSeqiXP_003581511.1, XM_003581463.3

Genome annotation databases

EnsemblPlantsiBRADI5G04080.1; BRADI5G04080.1; BRADI5G04080
GeneIDi100825888
GrameneiBRADI5G04080.1; BRADI5G04080.1; BRADI5G04080
KEGGibdi:100825888

Similar proteinsi

Entry informationi

Entry nameiI1IWH6_BRADI
AccessioniPrimary (citable) accession number: I1IWH6
Entry historyiIntegrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: May 23, 2018
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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