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I1IIX6 (I1IIX6_BRADI) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length174 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site By similarity. SAAS SAAS000894 RuleBase RU003627

Catalytic activity

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O. SAAS SAAS000894 RuleBase RU003627

3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2. SAAS SAAS000894 RuleBase RU003627

Subunit structure

8 large chains + 8 small chains By similarity. SAAS SAAS000894 RuleBase RU003627

Sequence similarities

Belongs to the RuBisCO small chain family. RuleBase RU003627

Ontologies

Keywords
   Biological processCarbon dioxide fixation SAAS SAAS000894 RuleBase RU003627
Photorespiration SAAS SAAS000894 RuleBase RU003627
Photosynthesis SAAS SAAS000894 RuleBase RU003627
   Cellular componentChloroplast SAAS SAAS000894
Plastid
   Molecular functionLyase SAAS SAAS000894 RuleBase RU003627
Monooxygenase SAAS SAAS000894 RuleBase RU003627
Oxidoreductase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: UniProtKB-KW

chloroplast ribulose bisphosphate carboxylase complex biogenesis

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

photorespiration

Inferred from electronic annotation. Source: UniProtKB-KW

photosynthesis

Inferred from electronic annotation. Source: UniProtKB-KW

response to blue light

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to far red light

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to red light

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentapoplast

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

cell wall

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

chloroplast envelope

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

chloroplast stroma

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

cytosolic ribosome

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

membrane

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

thylakoid

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionmonooxygenase activity

Inferred from electronic annotation. Source: UniProtKB-KW

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I1IIX6 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 46527A49BA9AB358

FASTA17419,520
        10         20         30         40         50         60 
MAPTVMASSA TSVAPFQGLK STAGLPLSRR SSNSLGRVSN GGRISCMQVW PIEGIKKFET 

        70         80         90        100        110        120 
LSYLPPLSVE SLLKQIEYLI RSKWVPCLEF SKVGFVFREH NSSPGYYDGR YWTMWKLPMF 

       130        140        150        160        170 
GCTDATQVLK ELEEVKKEYP DAYVRIIGFD NTRQVQCISF IAFKPPGCEE SGKA 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequencing and analysis of the model grass Brachypodium distachyon."
International Brachypodium Initiative
Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Bd21 EnsemblPlants BRADI4G08800.1.
[2]EnsemblPlants
Submitted (NOV-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: cv. Bd21 EnsemblPlants BRADI4G08800.1.

Cross-references

Sequence databases

RefSeqXP_003577109.1. XM_003577061.1.
XP_003577110.1. XM_003577062.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsBRADI4G08800.1; BRADI4G08800.1; BRADI4G08800.
GeneID100829841.
KEGGbdi:100829841.

Phylogenomic databases

KOK01602.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
IPR024680. RuBisCO_ssu_N.
[Graphical view]
PfamPF12338. RbcS. 1 hit.
PF00101. RuBisCO_small. 1 hit.
[Graphical view]
PRINTSPR00152. RUBISCOSMALL.
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI1IIX6_BRADI
AccessionPrimary (citable) accession number: I1IIX6
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: March 19, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)