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I1IIT7

- I1IIT7_BRADI

UniProt

I1IIT7 - I1IIT7_BRADI

Protein

Ribulose bisphosphate carboxylase small chain

Gene

BRADI4G08500

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 10 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
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    Functioni

    RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.UniRule annotationSAAS annotation

    Catalytic activityi

    2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.UniRule annotationSAAS annotation
    3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. copper ion binding Source: EnsemblPlants/Gramene
    2. monooxygenase activity Source: UniProtKB-KW
    3. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-KW
    2. chloroplast ribulose bisphosphate carboxylase complex biogenesis Source: EnsemblPlants/Gramene
    3. photorespiration Source: UniProtKB-KW
    4. photosynthesis Source: UniProtKB-KW
    5. response to blue light Source: EnsemblPlants/Gramene
    6. response to cold Source: EnsemblPlants/Gramene
    7. response to far red light Source: EnsemblPlants/Gramene
    8. response to red light Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotation, MonooxygenaseUniRule annotationSAAS annotation, Oxidoreductase

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation, PhotorespirationUniRule annotationSAAS annotation, PhotosynthesisUniRule annotationSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribulose bisphosphate carboxylase small chainUniRule annotation (EC:4.1.1.39UniRule annotation)
    Gene namesi
    Name:BRADI4G08500Imported
    OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
    Taxonomic identifieri15368 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeBrachypodieaeBrachypodium
    ProteomesiUP000008810: Chromosome 4

    Subcellular locationi

    GO - Cellular componenti

    1. apoplast Source: EnsemblPlants/Gramene
    2. chloroplast envelope Source: EnsemblPlants/Gramene
    3. chloroplast thylakoid membrane Source: EnsemblPlants/Gramene
    4. cytosolic ribosome Source: EnsemblPlants/Gramene
    5. thylakoid lumen Source: EnsemblPlants/Gramene

    Keywords - Cellular componenti

    ChloroplastSAAS annotation, Plastid

    Interactioni

    Subunit structurei

    8 large chains + 8 small chains.UniRule annotationSAAS annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO small chain family.UniRule annotation

    Phylogenomic databases

    KOiK01602.

    Family and domain databases

    Gene3Di3.30.190.10. 1 hit.
    InterProiIPR024681. RuBisCO_sc.
    IPR000894. RuBisCO_sc_dom.
    IPR024680. RuBisCO_ssu_N.
    [Graphical view]
    PfamiPF12338. RbcS. 1 hit.
    PF00101. RuBisCO_small. 1 hit.
    [Graphical view]
    PRINTSiPR00152. RUBISCOSMALL.
    SUPFAMiSSF55239. SSF55239. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I1IIT7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAPTVMASSA TSVAPFQGLK STAGLPVASR RSSNSLGSVS NGGRIRCMQV    50
    WPIEGIKKFE TLSYLPPLSV ESLLKQIEYL IRSKWVPCLE FSKVGFVFRE 100
    HNSSPGYYDG RYWTMWKLPM FGCTDATQVL KELEEVKKEY PDAYVRIIGF 150
    DNTRQVQCIS FIAFKPPGCE ESGKA 175
    Length:175
    Mass (Da):19,577
    Last modified:June 13, 2012 - v1
    Checksum:iAB4749AF5B2BB16C
    GO

    Sequence databases

    RefSeqiXP_003576920.1. XM_003576872.1.
    XP_003576921.1. XM_003576873.1.
    XP_003576922.1. XM_003576874.1.
    XP_003576923.1. XM_003576875.1.
    XP_003576924.1. XM_003576876.1.

    Genome annotation databases

    EnsemblPlantsiBRADI4G08500.1; BRADI4G08500.1; BRADI4G08500.
    GeneIDi100840557.
    KEGGibdi:100840557.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_003576920.1. XM_003576872.1.
    XP_003576921.1. XM_003576873.1.
    XP_003576922.1. XM_003576874.1.
    XP_003576923.1. XM_003576875.1.
    XP_003576924.1. XM_003576876.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi BRADI4G08500.1 ; BRADI4G08500.1 ; BRADI4G08500 .
    GeneIDi 100840557.
    KEGGi bdi:100840557.

    Phylogenomic databases

    KOi K01602.

    Family and domain databases

    Gene3Di 3.30.190.10. 1 hit.
    InterProi IPR024681. RuBisCO_sc.
    IPR000894. RuBisCO_sc_dom.
    IPR024680. RuBisCO_ssu_N.
    [Graphical view ]
    Pfami PF12338. RbcS. 1 hit.
    PF00101. RuBisCO_small. 1 hit.
    [Graphical view ]
    PRINTSi PR00152. RUBISCOSMALL.
    SUPFAMi SSF55239. SSF55239. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
      International Brachypodium Initiative
      Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Bd21Imported.
    2. EnsemblPlants
      Submitted (NOV-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: cv. Bd21Imported.

    Entry informationi

    Entry nameiI1IIT7_BRADI
    AccessioniPrimary (citable) accession number: I1IIT7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 10 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3