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I1IIT7 (I1IIT7_BRADI) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length175 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site By similarity. RuleBase RU003627 SAAS SAAS024681

Catalytic activity

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O. RuleBase RU003627 SAAS SAAS024681

3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2. RuleBase RU003627 SAAS SAAS024681

Subunit structure

8 large chains + 8 small chains By similarity. RuleBase RU003627 SAAS SAAS024681

Sequence similarities

Belongs to the RuBisCO small chain family. RuleBase RU003627

Ontologies

Keywords
   Biological processCarbon dioxide fixation RuleBase RU003627 SAAS SAAS024681
Photorespiration RuleBase RU003627 SAAS SAAS024681
Photosynthesis RuleBase RU003627 SAAS SAAS024681
   Cellular componentChloroplast SAAS SAAS024681
Plastid
   Molecular functionLyase RuleBase RU003627 SAAS SAAS024681
Monooxygenase RuleBase RU003627 SAAS SAAS024681
Oxidoreductase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: UniProtKB-KW

chloroplast ribulose bisphosphate carboxylase complex biogenesis

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

photorespiration

Inferred from electronic annotation. Source: UniProtKB-KW

photosynthesis

Inferred from electronic annotation. Source: UniProtKB-KW

response to blue light

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to cold

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to far red light

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to red light

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentapoplast

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

chloroplast envelope

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

chloroplast thylakoid membrane

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

cytosolic ribosome

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

thylakoid lumen

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functioncopper ion binding

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

monooxygenase activity

Inferred from electronic annotation. Source: UniProtKB-KW

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I1IIT7 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: AB4749AF5B2BB16C

FASTA17519,577
        10         20         30         40         50         60 
MAPTVMASSA TSVAPFQGLK STAGLPVASR RSSNSLGSVS NGGRIRCMQV WPIEGIKKFE 

        70         80         90        100        110        120 
TLSYLPPLSV ESLLKQIEYL IRSKWVPCLE FSKVGFVFRE HNSSPGYYDG RYWTMWKLPM 

       130        140        150        160        170 
FGCTDATQVL KELEEVKKEY PDAYVRIIGF DNTRQVQCIS FIAFKPPGCE ESGKA 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequencing and analysis of the model grass Brachypodium distachyon."
International Brachypodium Initiative
Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Bd21 EnsemblPlants BRADI4G08500.1.
[2]EnsemblPlants
Submitted (NOV-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: cv. Bd21 EnsemblPlants BRADI4G08500.1.

Cross-references

Sequence databases

RefSeqXP_003576920.1. XM_003576872.1.
XP_003576921.1. XM_003576873.1.
XP_003576922.1. XM_003576874.1.
XP_003576923.1. XM_003576875.1.
XP_003576924.1. XM_003576876.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsBRADI4G08500.1; BRADI4G08500.1; BRADI4G08500.
GeneID100840557.
KEGGbdi:100840557.

Phylogenomic databases

KOK01602.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
IPR024680. RuBisCO_ssu_N.
[Graphical view]
PfamPF12338. RbcS. 1 hit.
PF00101. RuBisCO_small. 1 hit.
[Graphical view]
PRINTSPR00152. RUBISCOSMALL.
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI1IIT7_BRADI
AccessionPrimary (citable) accession number: I1IIT7
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: March 19, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)