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Protein

Elongation factor Tu

Gene

BRADI3G47690

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: EnsemblPlants/Gramene
  2. GTP binding Source: UniProtKB-KW
  3. translation elongation factor activity Source: UniProtKB-KW

GO - Biological processi

  1. cuticle development Source: EnsemblPlants/Gramene
  2. GTP catabolic process Source: EnsemblPlants/Gramene
  3. very long-chain fatty acid metabolic process Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Gene namesi
Name:BRADI3G47690Imported
OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
Taxonomic identifieri15368 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeBrachypodieaeBrachypodium
ProteomesiUP000008810: Chromosome 3

Subcellular locationi

GO - Cellular componenti

  1. apoplast Source: EnsemblPlants/Gramene
  2. chloroplast envelope Source: EnsemblPlants/Gramene
  3. chloroplast stroma Source: EnsemblPlants/Gramene
  4. chloroplast thylakoid membrane Source: EnsemblPlants/Gramene
  5. nucleoid Source: EnsemblPlants/Gramene
  6. nucleolus Source: EnsemblPlants/Gramene
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

InParanoidiI1IB68.
KOiK02358.
OMAiNIKMVVN.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I1IB68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASLAAASAS TALLFPPSTS SSKPRLPLST SLGFSTPARS RRAAAGAGAG
60 70 80 90 100
SSGRRPGLLV VRAARAKFER TKPHVNIGTI GHVDHGKTTL TAALTMVLAS
110 120 130 140 150
VGGSAPKKYD EIDAAPEERA RGITINTATV EYETETRHYA HVDCPGHADY
160 170 180 190 200
VKNMITGAAQ MDGAILVVSG ADGPMPQTKE HILLAKQVGV PSIVVFLNKK
210 220 230 240 250
DQVDDEELLE LVDLEVRELL TAYEYNGDDV PIISGSALKA LEALMATPGI
260 270 280 290 300
KRGENEWVDG IFTLVDAVDA HIPVPQRQTD LPFLLAVEDV FSITGRGTVA
310 320 330 340 350
TGRIERGTVK VGDPVDLVGI RETRNATVTG VEMFQKTMDD AIAGDNVGLL
360 370 380 390 400
LRGMQKEDIE RGMVLAKPGS ITPHTKFEAV VYVLKKEEGG RHSPFFPGYR
410 420 430 440 450
PQFYMRTTDV TGNVTNIMND KDEEAKMCMP GDRIKMVVEL IQPVACEQGM
460 470
RFAIREGGKT VGAGVINNII Q
Length:471
Mass (Da):50,499
Last modified:June 13, 2012 - v1
Checksum:i5FDF906B24671201
GO

Sequence databases

RefSeqiXP_003575279.1. XM_003575231.2.

Genome annotation databases

EnsemblPlantsiBRADI3G47690.1; BRADI3G47690.1; BRADI3G47690.
GeneIDi100830133.
KEGGibdi:100830133.

Cross-referencesi

Sequence databases

RefSeqiXP_003575279.1. XM_003575231.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiBRADI3G47690.1; BRADI3G47690.1; BRADI3G47690.
GeneIDi100830133.
KEGGibdi:100830133.

Phylogenomic databases

InParanoidiI1IB68.
KOiK02358.
OMAiNIKMVVN.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
    International Brachypodium Initiative
    Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Bd21Imported.
  2. EnsemblPlants
    Submitted (NOV-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: cv. Bd21Imported.

Entry informationi

Entry nameiI1IB68_BRADI
AccessioniPrimary (citable) accession number: I1IB68
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: March 4, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.