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Protein

Glutamate decarboxylase

Gene

BRADI3G37830

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Name:BRADI3G37830Imported
OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
Taxonomic identifieri15368 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeBrachypodieaeBrachypodium
ProteomesiUP000008810 Componenti: Chromosome 3

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiI1I7Q1.
KOiK01580.
OMAiHINRVAT.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

I1I7Q1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLSRAISSA GDSVACTFAS RYVREELPRY RMPEQSIPKE AAYQIITDEL
60 70 80 90 100
MLDGNPRLNL ASFVTTWMEP ECAKLMMDSV NKNYVDMDEY PVTTELQNRC
110 120 130 140 150
VNMIAHLFNA PIKEDETAIG VSTVGSSEAI MLAGLAFKRK WQNKRKEQGK
160 170 180 190 200
PCDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLTEGYYVM DPLKAVEMVD
210 220 230 240 250
ENTICVAAIL GSTLTGEYED VKLLNDLLVE KNKETGWNVP IHVDAASGGF
260 270 280 290 300
IAPFLQPELE WDFRLPLVKS INVSGHKYGL VYPGVGWVIW RSKDDLPDEL
310 320 330 340 350
IFHINYLGTD QPTFTLNFSK GASQIIAQYY QLIRLGFEGY KHIMENCKGN
360 370 380 390 400
AAILREGIEA TGRFKVLSKE DGVPLLAISL KDSTGFTVFD ISENLRRFGW
410 420 430 440 450
IVPAYTMPAD AEHVAVLRVV IREDFSRSLA QRLIADINKV LRELDAHAVH
460 470 480 490
AVKITTAVAT QASEGMDDGV VTKKSVLDTE KEFASACMDL LKNKKTGVC
Length:499
Mass (Da):55,820
Last modified:June 13, 2012 - v1
Checksum:iA67E3FA81C171F07
GO

Sequence databases

RefSeqiXP_003574600.1. XM_003574552.2.

Genome annotation databases

EnsemblPlantsiBRADI3G37830.1; BRADI3G37830.1; BRADI3G37830.
GeneIDi100827187.
KEGGibdi:100827187.

Cross-referencesi

Sequence databases

RefSeqiXP_003574600.1. XM_003574552.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiBRADI3G37830.1; BRADI3G37830.1; BRADI3G37830.
GeneIDi100827187.
KEGGibdi:100827187.

Phylogenomic databases

InParanoidiI1I7Q1.
KOiK01580.
OMAiHINRVAT.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
    International Brachypodium Initiative
    Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Bd21Imported.
  2. EnsemblPlants
    Submitted (NOV-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: cv. Bd21Imported.

Entry informationi

Entry nameiI1I7Q1_BRADI
AccessioniPrimary (citable) accession number: I1I7Q1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: February 4, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.