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Protein
Submitted name:

Uncharacterized protein

Gene

BRADI1G59220

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:BRADI1G59220Imported
OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
Taxonomic identifieri15368 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeBrachypodieaeBrachypodium
ProteomesiUP000008810 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi15368.BRADI1G59220.1.

Family & Domainsi

Phylogenomic databases

InParanoidiI1H4C6.
KOiK14272.
OMAiAMYTFPR.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

I1H4C6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMGRKALDYE ELNENVKKVQ YAVRGELYLR ASELQKEGKR IIFTNVGNPH
60 70 80 90 100
ALGQKPLTFP RQVVALCQAP FLLDDPNVGL IFPADAIARA KHYLSMAPGG
110 120 130 140 150
LGAYSDSRGI PGVRKEVAEF IQRRDGYPSD PELIYLTDGA SKGVMQMLNA
160 170 180 190 200
IIRNERDGIL VPVPQYPLYS AAISLFGGSL VPYYLEEEAN WGLDIVTTRQ
210 220 230 240 250
SVAAARSKGM TVRAMVIINP GNPTGQCLSE ANIRELLNFC YQENLVLLAD
260 270 280 290 300
EVYQQNIYQD ERPFISARKV LFDMGPPISR EVQLISFHTV SKGYWGECGQ
310 320 330 340 350
RGGYFEMTNI PPKTVDEIYK VASIALSPNV PGQIFMGLMM NPPKPGDISY
360 370 380 390 400
LKFATESKSI LDSLRRRAQI MTDGFNSCQN VVCNFTEGAM YSFPQIRLPK
410 420 430 440 450
RAIDTAKSAG KEPDVFYCLK LLEATGISTV PGSGFGQKEG VFHLRTTILP
460 470
AEEDMPAIMS SFKKFNDSFM EQYQDYSRL
Length:479
Mass (Da):53,349
Last modified:June 13, 2012 - v1
Checksum:i2F19E279B8D5451A
GO

Sequence databases

RefSeqiXP_003557680.1. XM_003557632.2.

Genome annotation databases

EnsemblPlantsiBRADI1G59220.1; BRADI1G59220.1; BRADI1G59220.
BRADI1G59220.2; BRADI1G59220.2; BRADI1G59220.
GeneIDi100844005.
KEGGibdi:100844005.

Cross-referencesi

Sequence databases

RefSeqiXP_003557680.1. XM_003557632.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi15368.BRADI1G59220.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiBRADI1G59220.1; BRADI1G59220.1; BRADI1G59220.
BRADI1G59220.2; BRADI1G59220.2; BRADI1G59220.
GeneIDi100844005.
KEGGibdi:100844005.

Phylogenomic databases

InParanoidiI1H4C6.
KOiK14272.
OMAiAMYTFPR.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
    International Brachypodium Initiative
    Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Bd21Imported.
  2. EnsemblPlants
    Submitted (NOV-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: cv. Bd21Imported.

Entry informationi

Entry nameiI1H4C6_BRADI
AccessioniPrimary (citable) accession number: I1H4C6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: June 24, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.