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I1GWZ8 (I1GWZ8_BRADI) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length447 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2061Nucleophile By similarity PIRSR PIRSR001028-1
Active site2311Proton donor By similarity PIRSR PIRSR001028-1

Sequences

Sequence LengthMass (Da)Tools
I1GWZ8 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 5C1A3A84AFF77F45

FASTA44748,750
        10         20         30         40         50         60 
MGKHGSHLCC FSLLSLLLLL AGFASGHQVL FQGFNWESWK QQGGWYNMLL GKVDDIAAAG 

        70         80         90        100        110        120 
VTHVWLPPPS HSVSNEGYMP GRLYDLDASK YGSASELKSL IGALHGKGVQ AIADVVINHR 

       130        140        150        160        170        180 
CADYKDSRGI YCIFEGGTAD GRLDWGPHMI CRDDTAYGDG TANLDTGADF AAAPDIDHLN 

       190        200        210        220        230        240 
DRVQRELTDW LLWLKSDLGF DAWRLDFAKG YSPEMAKVYI DGTKPGLAVA EVWNDMTPGG 

       250        260        270        280        290        300 
DGKPAYDQDA HRQALVNWVD RVGGKDSAGM VFDFTTKGIL NVAVEGELWR LIDPQGKAPG 

       310        320        330        340        350        360 
VVGWWPAKAV TFVDNHDTGS TQAMWPFPAD KVMLGYAYIL THPGTPCIFY DHFFNWGFKE 

       370        380        390        400        410        420 
EIAALVAVRK RNGITATSAL RILMHDGDAY VAEVDGKVVV KIGSRYDVAA VIPSGFVTTA 

       430        440 
HGKDYAVWEK AGVAAAAGFQ RSRRSLD 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequencing and analysis of the model grass Brachypodium distachyon."
International Brachypodium Initiative
Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Bd21 EnsemblPlants BRADI1G35050.1.
[2]EnsemblPlants
Submitted (JAN-2014) to UniProtKB
Cited for: IDENTIFICATION.
Strain: cv. Bd21 EnsemblPlants BRADI1G35050.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GU188687 Genomic DNA. No translation available.
RefSeqXP_003563559.1. XM_003563511.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsBRADI1G35050.1; BRADI1G35050.1; BRADI1G35050.
GeneID100835083.
KEGGbdi:100835083.

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI1GWZ8_BRADI
AccessionPrimary (citable) accession number: I1GWZ8
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: July 9, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)