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Protein

Alpha-amylase

Gene

LOC100835083

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Cofactori

Ca2+UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei206NucleophileUniRule annotation1
Active sitei231Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan glucanohydrolaseUniRule annotation
Gene namesi
Name:LOC100835083Imported
ORF Names:BRADI_1g35050Imported
OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
Taxonomic identifieri15368 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeBrachypodieaeBrachypodium
Proteomesi
  • UP000008810 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26UniRule annotationAdd BLAST26
ChainiPRO_501060495127 – 447Alpha-amylaseUniRule annotationAdd BLAST421

Interactioni

Protein-protein interaction databases

STRINGi15368.BRADI1G35050.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 369AamyInterPro annotationAdd BLAST342
Domaini370 – 430Alpha-amyl_C2InterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiKOG0471. Eukaryota.
COG0366. LUCA.
InParanoidiI1GWZ8.
KOiK01176.
OMAiAVWEKSA.
OrthoDBiEOG093600FS.

Family and domain databases

InterProiView protein in InterPro
IPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

I1GWZ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKHGSHLCC FSLLSLLLLL AGFASGHQVL FQGFNWESWK QQGGWYNMLL
60 70 80 90 100
GKVDDIAAAG VTHVWLPPPS HSVSNEGYMP GRLYDLDASK YGSASELKSL
110 120 130 140 150
IGALHGKGVQ AIADVVINHR CADYKDSRGI YCIFEGGTAD GRLDWGPHMI
160 170 180 190 200
CRDDTAYGDG TANLDTGADF AAAPDIDHLN DRVQRELTDW LLWLKSDLGF
210 220 230 240 250
DAWRLDFAKG YSPEMAKVYI DGTKPGLAVA EVWNDMTPGG DGKPAYDQDA
260 270 280 290 300
HRQALVNWVD RVGGKDSAGM VFDFTTKGIL NVAVEGELWR LIDPQGKAPG
310 320 330 340 350
VVGWWPAKAV TFVDNHDTGS TQAMWPFPAD KVMLGYAYIL THPGTPCIFY
360 370 380 390 400
DHFFNWGFKE EIAALVAVRK RNGITATSAL RILMHDGDAY VAEVDGKVVV
410 420 430 440
KIGSRYDVAA VIPSGFVTTA HGKDYAVWEK AGVAAAAGFQ RSRRSLD
Length:447
Mass (Da):48,750
Last modified:June 13, 2012 - v1
Checksum:i5C1A3A84AFF77F45
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000880 Genomic DNA. Translation: KQK17525.1.
RefSeqiXP_003563559.1. XM_003563511.3.

Genome annotation databases

EnsemblPlantsiBRADI1G35050.1; BRADI1G35050.1; BRADI1G35050.
GeneIDi100835083.
GrameneiBRADI1G35050.1; BRADI1G35050.1; BRADI1G35050.
KEGGibdi:100835083.

Similar proteinsi

Entry informationi

Entry nameiI1GWZ8_BRADI
AccessioniPrimary (citable) accession number: I1GWZ8
Entry historyiIntegrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: September 27, 2017
This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported