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I1GNX4 (I1GNX4_BRADI) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length497 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000382
   Molecular functionLyase RuleBase RU000382
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processglutamate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytosol

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

nucleus

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionglutamate decarboxylase activity

Inferred from electronic annotation. Source: InterPro

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I1GNX4 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: DC6F665A081F0EFB

FASTA49755,897
        10         20         30         40         50         60 
MVLSHAVSAG SSDDSVHSTF ASRYVRAALP RFRMPENSIP KEAAYQIIND ELMLDGNPRL 

        70         80         90        100        110        120 
NLASFVTTWM EPECNKLMMD SINKNYVDMD EYPVTTELQN RCVNMIAHLF NAPLGETETA 

       130        140        150        160        170        180 
VGVGTVGSSE AIMLAGLAFK RRWQNKMKAA GKPCDKPNIV TGANVQVCWE KFARYFEVEL 

       190        200        210        220        230        240 
KEVKLREGYY VMDPEKAVEL VDENTICVAA ILGSTLNGEF EDVKMLNDLL VKKNEETGWD 

       250        260        270        280        290        300 
TPIHVDAASG GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGIGWC IWRSKEDLPE 

       310        320        330        340        350        360 
ELIFHINYLG ADQPTFTLNF SKGSSQVIAQ YYQLIRLGFE GYKNIMDNCR ENAKVLKEGL 

       370        380        390        400        410        420 
EQTGRFNIVS KDEGVPLVAF SLKDSSRHDE FEISEFLRRF GWIVPAYTMP PDAQHVTVLR 

       430        440        450        460        470        480 
VVIREDFSRT FAERLVIDIE KVLHELDALP SRGGPPSLTS ANANGDAPSE RDIERQREVV 

       490 
AIWKMAVLAK KKTNGVC 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequencing and analysis of the model grass Brachypodium distachyon."
International Brachypodium Initiative
Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Bd21 EnsemblPlants BRADI1G10480.1.
[2]EnsemblPlants
Submitted (NOV-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: cv. Bd21 EnsemblPlants BRADI1G10480.1.

Cross-references

Sequence databases

RefSeqXP_003560535.1. XM_003560487.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsBRADI1G10480.1; BRADI1G10480.1; BRADI1G10480.
GeneID100831298.
KEGGbdi:100831298.

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI1GNX4_BRADI
AccessionPrimary (citable) accession number: I1GNX4
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: May 14, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)