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I1GNX4

- I1GNX4_BRADI

UniProt

I1GNX4 - I1GNX4_BRADI

Protein

Glutamate decarboxylase

Gene

BRADI1G10480

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 11 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Name:BRADI1G10480Imported
    OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
    Taxonomic identifieri15368 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeBrachypodieaeBrachypodium
    ProteomesiUP000008810: Chromosome 1

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: EnsemblPlants/Gramene
    2. nucleus Source: EnsemblPlants/Gramene

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    I1GNX4-1 [UniParc]FASTAAdd to Basket

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    MVLSHAVSAG SSDDSVHSTF ASRYVRAALP RFRMPENSIP KEAAYQIIND    50
    ELMLDGNPRL NLASFVTTWM EPECNKLMMD SINKNYVDMD EYPVTTELQN 100
    RCVNMIAHLF NAPLGETETA VGVGTVGSSE AIMLAGLAFK RRWQNKMKAA 150
    GKPCDKPNIV TGANVQVCWE KFARYFEVEL KEVKLREGYY VMDPEKAVEL 200
    VDENTICVAA ILGSTLNGEF EDVKMLNDLL VKKNEETGWD TPIHVDAASG 250
    GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGIGWC IWRSKEDLPE 300
    ELIFHINYLG ADQPTFTLNF SKGSSQVIAQ YYQLIRLGFE GYKNIMDNCR 350
    ENAKVLKEGL EQTGRFNIVS KDEGVPLVAF SLKDSSRHDE FEISEFLRRF 400
    GWIVPAYTMP PDAQHVTVLR VVIREDFSRT FAERLVIDIE KVLHELDALP 450
    SRGGPPSLTS ANANGDAPSE RDIERQREVV AIWKMAVLAK KKTNGVC 497
    Length:497
    Mass (Da):55,897
    Last modified:June 13, 2012 - v1
    Checksum:iDC6F665A081F0EFB
    GO

    Sequence databases

    RefSeqiXP_003560535.1. XM_003560487.1.

    Genome annotation databases

    EnsemblPlantsiBRADI1G10480.1; BRADI1G10480.1; BRADI1G10480.
    GeneIDi100831298.
    KEGGibdi:100831298.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_003560535.1. XM_003560487.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi BRADI1G10480.1 ; BRADI1G10480.1 ; BRADI1G10480 .
    GeneIDi 100831298.
    KEGGi bdi:100831298.

    Phylogenomic databases

    KOi K01580.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
      International Brachypodium Initiative
      Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Bd21Imported.
    2. EnsemblPlants
      Submitted (NOV-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: cv. Bd21Imported.

    Entry informationi

    Entry nameiI1GNX4_BRADI
    AccessioniPrimary (citable) accession number: I1GNX4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 11 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3