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I1GKU6

- I1GKU6_BRADI

UniProt

I1GKU6 - I1GKU6_BRADI

Protein

Elongation factor Tu

Gene

BRADI1G01580

Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 11 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: EnsemblPlants/Gramene
    2. cobalt ion binding Source: EnsemblPlants/Gramene
    3. GTPase activity Source: InterPro
    4. GTP binding Source: UniProtKB-KW
    5. translation elongation factor activity Source: UniProtKB-KW
    6. zinc ion binding Source: EnsemblPlants/Gramene

    GO - Biological processi

    1. response to cadmium ion Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    Elongation factorUniRule annotation

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Gene namesi
    Name:BRADI1G01580Imported
    OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
    Taxonomic identifieri15368 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeBrachypodieaeBrachypodium
    ProteomesiUP000008810: Chromosome 1

    Subcellular locationi

    GO - Cellular componenti

    1. cell wall Source: EnsemblPlants/Gramene
    2. intracellular Source: InterPro

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    KOiK02358.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I1GKU6-1 [UniParc]FASTAAdd to Basket

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    MAAAAVLRNA GTRRVLAYPT FRAAVISGPA ALPDASAAAG TQTAPPAFAA    50
    GGGLWARSMA TFTRTKPHVN VGTIGHVDHG KTTLTAAITK VLAEAGSAKA 100
    VAFDEIDKAP EEKARGITIS TAHVEYETAK RHYAHVDCPG HADYVKNMIT 150
    GAAQMDGGIL VVSAPDGPMP QTKEHILLAR QVGVPSLVCF LNKVDAVDDP 200
    ELLELVEMEL RELLSFYKFP GDDIPIIRGS ALSALQGTND EIGKNAILKL 250
    MDAVDEYIPD PVRVLDKHFL MPIEDVFSIQ GRGTVVTGRV EQGTIKTGED 300
    VEILGLSETG PLKTTVTGVE MFKKILNHGE AGDNVGLLLR GLKRGDVQRG 350
    QVVCKPGSVK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYFRTADITG 400
    KVELPQNVKM VMPGDNVTAI FELISPVPLE PGQRFALREG GRTVGAGVIA 450
    KVMSE 455
    Length:455
    Mass (Da):48,739
    Last modified:June 13, 2012 - v1
    Checksum:i02408BDAA2A73A48
    GO

    Sequence databases

    RefSeqiXP_003562281.1. XM_003562233.1.

    Genome annotation databases

    EnsemblPlantsiBRADI1G01580.1; BRADI1G01580.1; BRADI1G01580.
    GeneIDi100829675.
    KEGGibdi:100829675.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_003562281.1. XM_003562233.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi BRADI1G01580.1 ; BRADI1G01580.1 ; BRADI1G01580 .
    GeneIDi 100829675.
    KEGGi bdi:100829675.

    Phylogenomic databases

    KOi K02358.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
      International Brachypodium Initiative
      Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Bd21Imported.
    2. EnsemblPlants
      Submitted (NOV-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: cv. Bd21Imported.

    Entry informationi

    Entry nameiI1GKU6_BRADI
    AccessioniPrimary (citable) accession number: I1GKU6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 11 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3