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I1GKU6

- I1GKU6_BRADI

UniProt

I1GKU6 - I1GKU6_BRADI

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Protein
Elongation factor Tu
Gene
BRADI1G01580
Organism
Brachypodium distachyon (Purple false brome) (Trachynia distachya)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: EnsemblPlants/Gramene
  2. GTP binding Source: UniProtKB-KW
  3. GTPase activity Source: InterPro
  4. cobalt ion binding Source: EnsemblPlants/Gramene
  5. translation elongation factor activity Source: UniProtKB-KW
  6. zinc ion binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. response to cadmium ion Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Gene namesi
Name:BRADI1G01580Imported
OrganismiBrachypodium distachyon (Purple false brome) (Trachynia distachya)Imported
Taxonomic identifieri15368 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeBrachypodieaeBrachypodium
ProteomesiUP000008810: Chromosome 1

Subcellular locationi

GO - Cellular componenti

  1. cell wall Source: EnsemblPlants/Gramene
  2. intracellular Source: InterPro
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I1GKU6-1 [UniParc]FASTAAdd to Basket

« Hide

MAAAAVLRNA GTRRVLAYPT FRAAVISGPA ALPDASAAAG TQTAPPAFAA    50
GGGLWARSMA TFTRTKPHVN VGTIGHVDHG KTTLTAAITK VLAEAGSAKA 100
VAFDEIDKAP EEKARGITIS TAHVEYETAK RHYAHVDCPG HADYVKNMIT 150
GAAQMDGGIL VVSAPDGPMP QTKEHILLAR QVGVPSLVCF LNKVDAVDDP 200
ELLELVEMEL RELLSFYKFP GDDIPIIRGS ALSALQGTND EIGKNAILKL 250
MDAVDEYIPD PVRVLDKHFL MPIEDVFSIQ GRGTVVTGRV EQGTIKTGED 300
VEILGLSETG PLKTTVTGVE MFKKILNHGE AGDNVGLLLR GLKRGDVQRG 350
QVVCKPGSVK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYFRTADITG 400
KVELPQNVKM VMPGDNVTAI FELISPVPLE PGQRFALREG GRTVGAGVIA 450
KVMSE 455
Length:455
Mass (Da):48,739
Last modified:June 13, 2012 - v1
Checksum:i02408BDAA2A73A48
GO

Sequence databases

RefSeqiXP_003562281.1. XM_003562233.1.

Genome annotation databases

EnsemblPlantsiBRADI1G01580.1; BRADI1G01580.1; BRADI1G01580.
GeneIDi100829675.
KEGGibdi:100829675.

Cross-referencesi

Sequence databases

RefSeqi XP_003562281.1. XM_003562233.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi BRADI1G01580.1 ; BRADI1G01580.1 ; BRADI1G01580 .
GeneIDi 100829675.
KEGGi bdi:100829675.

Phylogenomic databases

KOi K02358.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequencing and analysis of the model grass Brachypodium distachyon."
    International Brachypodium Initiative
    Nature 463:763-768(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Bd21Imported.
  2. EnsemblPlants
    Submitted (NOV-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: cv. Bd21Imported.

Entry informationi

Entry nameiI1GKU6_BRADI
AccessioniPrimary (citable) accession number: I1GKU6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: April 16, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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