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Protein
Submitted name:

SET domain-containing protein

Gene

COCSUDRAFT_13194

Organism
Coccomyxa subellipsoidea (strain C-169) (Green microalga)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
SET domain-containing proteinImported
Gene namesi
ORF Names:COCSUDRAFT_13194Imported
OrganismiCoccomyxa subellipsoidea (strain C-169) (Green microalga)Imported
Taxonomic identifieri574566 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaTrebouxiophyceaeTrebouxiophyceae incertae sedisCoccomyxaceaeCoccomyxa
Proteomesi
  • UP000007264 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 180YDGInterPro annotationAdd BLAST151
Domaini315 – 459SETInterPro annotationAdd BLAST145

Phylogenomic databases

KOiK11420.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiView protein in InterPro
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
PfamiView protein in Pfam
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
SMARTiView protein in SMART
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiView protein in PROSITE
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.

Sequencei

Sequence statusi: Fragment.

I0Z455-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GRKMSQRPDT KARKIMSDEG LCVNTKKTAG HVPGHPPSNR YFLRSEMGCL
60 70 80 90 100
GVHFPPLTGI DYCTSKEIPS GCPEFAISIV NSGCYQDDDD KGEQLIYTGQ
110 120 130 140 150
GGCDLLGNKK QVSDQVMRAG NKALVGNIEL GIPIRVVRKN KDAASEYGNI
160 170 180 190 200
FIYDGLYDVV KYWSEKGVEG FDVFKYLMIR RPEQAELLSK SLAFGGTSAP
210 220 230 240 250
KNHSIDKDIS NGLERIPVSS INRGVSLPLL RYIVEYEFDE NMPQPEPRVL
260 270 280 290 300
PANFKNNPHD YVKELNGGSM PYSKNKNNHF IVDCARAMIF ECGPWTGCPD
310 320 330 340 350
GIHCGYAVSQ QGLQWRLEVF KTRFKGWGVR SWDTIPVGSY ITTFVGRVHR
360 370 380 390 400
IEDCDGSKDD TFYFDLGKRT DFGWDNKPIE EGHDMCVLRT SACNLDQETK
410 420 430 440 450
YYVDGGETGG MSRYINHSCD PNLYVQPVLC DHADVDMPKI CLFAAKNIPP
460 470 480
FEELTYDYGP QYIRENLDGK CNCGAVGCQA PAE
Length:483
Mass (Da):54,004
Last modified:June 13, 2012 - v1
Checksum:iE5F3FC14A3EA5CEE
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGSI01000004 Genomic DNA. Translation: EIE25424.1.
RefSeqiXP_005649968.1. XM_005649911.1.

Genome annotation databases

GeneIDi17043426.
KEGGicsl:COCSUDRAFT_13194.

Entry informationi

Entry nameiI0Z455_COCSC
AccessioniPrimary (citable) accession number: I0Z455
Entry historyiIntegrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: June 7, 2017
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported