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Protein
Submitted name:

SET domain-containing protein

Gene

COCSUDRAFT_56783

Organism
Coccomyxa subellipsoidea (strain C-169) (Green microalga)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
SET domain-containing proteinImported
Gene namesi
ORF Names:COCSUDRAFT_56783Imported
OrganismiCoccomyxa subellipsoidea (strain C-169) (Green microalga)Imported
Taxonomic identifieri574566 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaTrebouxiophyceaeTrebouxiophyceae incertae sedisCoccomyxaceaeCoccomyxa
Proteomesi
  • UP000007264 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini315 – 449YDGInterPro annotationAdd BLAST135
Domaini608 – 760SETInterPro annotationAdd BLAST153

Phylogenomic databases

KOiK11420.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiView protein in InterPro
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
PfamiView protein in Pfam
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
SMARTiView protein in SMART
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiView protein in PROSITE
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.

Sequencei

Sequence statusi: Complete.

I0YT53-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEAERGRPAK RARVDGGDED QENSKQLNTI SGQSCKKAKA AEQEEDGVAR
60 70 80 90 100
PSTDAVLHGN GELPAEPQQT LPAASPSPLQ EKVAEPAPAR SAEQIPPVAA
110 120 130 140 150
ANVAAVQTNG CTGSAPEKTD SQEGGTNPSQ QLGAVSTPNG EVHAPPAPDG
160 170 180 190 200
MPAVQREVEA AATTLKGLKD ISATQTLEYP AALPMQGQSA GASEAAGPSQ
210 220 230 240 250
PPQQSAGASE AAGPSQVPHQ SAEAAGPSQP EAAAEPQPSH EEGGATPEMI
260 270 280 290 300
AAVNEKYHLN EPYKVDVEAA AAGAERLRKY RQHVADLKAQ GRMKPDMIAF
310 320 330 340 350
KDRKVELGTP LQVIGQIPGV AVGAKFQNKG ELAIMGVHTN ISGGIYFKGK
360 370 380 390 400
NPAYSIVLAG NYSDDHDAGD VIDYTGMGGQ DSNGRQMADQ DWVRGNLALK
410 420 430 440 450
LSFEQGTPIR VIRGVNVEKT YDGLYRVTKC WKEAGKDHDR IICRFRLVPI
460 470 480 490 500
PGHSMLSERV IMRARHVKRA FDVVHLQGGH RLLLSSADLH RLPPPTERPG
510 520 530 540 550
LITEDISGGA ETVKIPAFNS VDDTPLDPLE YIRESRIGSE AAQRRADDAK
560 570 580 590 600
VAYCHVFCGR AKSACAYDEQ GLVNRKHANL PCFAECPATC AGSRLCKKNQ
610 620 630 640 650
VVTKGITLPL EVVYTGPARQ WGLTCAQDIP EGAFICEYAG SVITDEEADN
660 670 680 690 700
LDAAADHDKY LYDMSDFVRE NIPDKADKGG FRPPVPPDPA DPTLLIENCL
710 720 730 740 750
TIDARCTGNV ARFMNHACTG GNNVFPRPVL VEGCTGLFYK VAFFAAQFIP
760 770 780 790 800
VGTELTYDYH WKESHFKGGC HCGSGTCRAP AGQPPPLSAS NPPPAPAGQL
810 820 830 840
PPPMAKSPPA PVPLPPPVAK DAPPAALPDL PRASATVAMN TAADAV
Length:846
Mass (Da):89,588
Last modified:June 13, 2012 - v1
Checksum:i7B90B95F3BA31F1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGSI01000012 Genomic DNA. Translation: EIE21572.1.
RefSeqiXP_005646116.1. XM_005646059.1.

Genome annotation databases

GeneIDi17039556.
KEGGicsl:COCSUDRAFT_56783.

Entry informationi

Entry nameiI0YT53_COCSC
AccessioniPrimary (citable) accession number: I0YT53
Entry historyiIntegrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: June 7, 2017
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported