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Protein

Superoxide dismutase

Gene

sodA

Organism
Stenotrophomonas maltophilia D457
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciSMAL1163399:GLKX-2814-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
ORF Names:SMD_2814Imported
OrganismiStenotrophomonas maltophilia D457Imported
Taxonomic identifieri1163399 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeStenotrophomonasStenotrophomonas maltophilia group
ProteomesiUP000007390 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliI0KQK4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I0KQK4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYTLPKLSY AYDALEPHID AATMEIHHTK HHQTYINNVN AALEGTEYAD
60 70 80 90 100
LPVEELVKKL KSLPENLQGP VRNNGGGHAN HSLFWTVMAP NAGGNPVGDV
110 120 130 140 150
AKAIDKDLGG FDKFKDAFTK AALTRFGSGW AWLSVTPDKK VVVESTGNQD
160 170 180 190 200
SPLMEGNTPI LGLDVWEHAY YLKYQNRRPE YIGAFFNVID WNEVERRYQE

AIA
Length:203
Mass (Da):22,675
Last modified:June 13, 2012 - v1
Checksum:i52A91EBEA2505162
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE798556 Genomic DNA. Translation: CCH13344.1.
RefSeqiWP_005410310.1. NC_017671.1.
YP_006185515.1. NC_017671.1.

Genome annotation databases

EnsemblBacteriaiCCH13344; CCH13344; SMD_2814.
GeneIDi6391562.
KEGGismz:SMD_2814.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE798556 Genomic DNA. Translation: CCH13344.1.
RefSeqiWP_005410310.1. NC_017671.1.
YP_006185515.1. NC_017671.1.

3D structure databases

ProteinModelPortaliI0KQK4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCH13344; CCH13344; SMD_2814.
GeneIDi6391562.
KEGGismz:SMD_2814.

Phylogenomic databases

KOiK04564.

Enzyme and pathway databases

BioCyciSMAL1163399:GLKX-2814-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Whole-genome sequence of Stenotrophomonas maltophilia D457, a clinical isolate and a model strain."
    Lira F., Hernandez A., Belda E., Sanchez M.B., Moya A., Silva F.J., Martinez J.L.
    J. Bacteriol. 194:3563-3564(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: D457Imported.

Entry informationi

Entry nameiI0KQK4_STEMA
AccessioniPrimary (citable) accession number: I0KQK4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: May 27, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.