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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

amyS

Organism
Fibrella aestuarina BUZ 2
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei255 – 2551NucleophileUniRule annotation
Active sitei282 – 2821Proton donorUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciFAES1166018-WGS:GSNK-5402-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:amySImported
ORF Names:FAES_5341Imported
OrganismiFibrella aestuarina BUZ 2Imported
Taxonomic identifieri1166018 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeFibrella
ProteomesiUP000011058 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

I0KGT7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVALSGVTL LGTIGLFLTS CEPQVAPEFQ PKVSNARAAA PVVNGVMMQG
60 70 80 90 100
FYWNVPKTTT AGTWWQNLAA KATELQTAGI TALWIPPAYK GGSVDDVGYG
110 120 130 140 150
VYDRYDLGEF NQKGTVATRY GTLAQLQSAI TVLHSKNIQV YEDMVMNHLT
160 170 180 190 200
WADYTENRNN ENIYTGFSYP GRNNTYSAYK WNATLFSGYQ RGDGSWNQWQ
210 220 230 240 250
PWDFASYNNG DAYDNLLGCE IKYNNGVGSN SAANETITWG NWITTKLGLD
260 270 280 290 300
GYRLDATKHI YTPFLNNWLD QVKTTSRFAV SEAWFNNVQW LQDYAAATGG
310 320 330 340 350
RTSLFDVPLH YTFVNMSNGN GAWDMRGLAF AGFTEANGSL SVSFVDNHDT
360 370 380 390 400
DAPSGGLRSP VVNLKMLAYA YILTRDKGYP CVFYRDYYEY GLGAQIKKLI
410 420 430 440 450
DIRKANGYGS GYEYTSVNDA DVYVYSRAGD TTHKGMLVML NDGSGASTKG
460 470 480 490
VTTPFKNATL TDKTGNRTGT VTTNASGFGS FPVNGRSYSV WVPN
Length:494
Mass (Da):54,494
Last modified:June 12, 2012 - v1
Checksum:i929321F61B426661
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE796683 Genomic DNA. Translation: CCH03340.1.
RefSeqiWP_015334437.1. NC_020054.1.
YP_007323933.1. NC_020054.1.

Genome annotation databases

EnsemblBacteriaiCCH03340; CCH03340; FAES_5341.
KEGGifae:FAES_5341.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE796683 Genomic DNA. Translation: CCH03340.1.
RefSeqiWP_015334437.1. NC_020054.1.
YP_007323933.1. NC_020054.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCH03340; CCH03340; FAES_5341.
KEGGifae:FAES_5341.

Phylogenomic databases

KOiK01176.

Enzyme and pathway databases

BioCyciFAES1166018-WGS:GSNK-5402-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome Sequence of Fibrella aestuarina BUZ 2T, a Filamentous Marine Bacterium."
    Filippini M., Qi W., Blom J., Goesmann A., Smits T.H., Bagheri H.C.
    J. Bacteriol. 194:3555-3555(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BUZ 2Imported.

Entry informationi

Entry nameiI0KGT7_9BACT
AccessioniPrimary (citable) accession number: I0KGT7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2012
Last sequence update: June 12, 2012
Last modified: March 31, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.