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I0KGT7 (I0KGT7_9BACT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.1 EMBL CCH03340.1
Gene names
Name:amyS EMBL CCH03340.1
ORF Names:FAES_5341 EMBL CCH03340.1
OrganismFibrella aestuarina BUZ 2 [Complete proteome] EMBL CCH03340.1
Taxonomic identifier1166018 [NCBI]
Taxonomic lineageBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeFibrella

Protein attributes

Sequence length494 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Molecular functionGlycosidase EMBL CCH03340.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
I0KGT7 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 929321F61B426661

FASTA49454,494
        10         20         30         40         50         60 
MRVALSGVTL LGTIGLFLTS CEPQVAPEFQ PKVSNARAAA PVVNGVMMQG FYWNVPKTTT 

        70         80         90        100        110        120 
AGTWWQNLAA KATELQTAGI TALWIPPAYK GGSVDDVGYG VYDRYDLGEF NQKGTVATRY 

       130        140        150        160        170        180 
GTLAQLQSAI TVLHSKNIQV YEDMVMNHLT WADYTENRNN ENIYTGFSYP GRNNTYSAYK 

       190        200        210        220        230        240 
WNATLFSGYQ RGDGSWNQWQ PWDFASYNNG DAYDNLLGCE IKYNNGVGSN SAANETITWG 

       250        260        270        280        290        300 
NWITTKLGLD GYRLDATKHI YTPFLNNWLD QVKTTSRFAV SEAWFNNVQW LQDYAAATGG 

       310        320        330        340        350        360 
RTSLFDVPLH YTFVNMSNGN GAWDMRGLAF AGFTEANGSL SVSFVDNHDT DAPSGGLRSP 

       370        380        390        400        410        420 
VVNLKMLAYA YILTRDKGYP CVFYRDYYEY GLGAQIKKLI DIRKANGYGS GYEYTSVNDA 

       430        440        450        460        470        480 
DVYVYSRAGD TTHKGMLVML NDGSGASTKG VTTPFKNATL TDKTGNRTGT VTTNASGFGS 

       490 
FPVNGRSYSV WVPN 

« Hide

References

[1]"Genome Sequence of Fibrella aestuarina BUZ 2T, a Filamentous Marine Bacterium."
Filippini M., Qi W., Blom J., Goesmann A., Smits T.H., Bagheri H.C.
J. Bacteriol. 194:3555-3555(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BUZ 2 EMBL CCH03340.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE796683 Genomic DNA. Translation: CCH03340.1.
RefSeqYP_007323933.1. NC_020054.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCH03340; CCH03340; FAES_5341.
GeneID14418302.
KEGGfae:FAES_5341.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycFAES1166018-WGS:GSNK-5402-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameI0KGT7_9BACT
AccessionPrimary (citable) accession number: I0KGT7
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: July 9, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)