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I0K3J0

- I0K3J0_9BACT

UniProt

I0K3J0 - I0K3J0_9BACT

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Protein

Xylose isomerase

Gene
xylA, FAES_0682
Organism
Fibrella aestuarina BUZ 2
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei111 – 1111 By similarityUniRule annotation
Active sitei114 – 1141 By similarityUniRule annotation
Metal bindingi242 – 2421Magnesium 1 By similarityUniRule annotation
Metal bindingi278 – 2781Magnesium 1 By similarityUniRule annotation
Metal bindingi278 – 2781Magnesium 2 By similarityUniRule annotation
Metal bindingi281 – 2811Magnesium 2 By similarityUniRule annotation
Metal bindingi306 – 3061Magnesium 1 By similarityUniRule annotation
Metal bindingi317 – 3171Magnesium 2 By similarityUniRule annotation
Metal bindingi319 – 3191Magnesium 2 By similarityUniRule annotation
Metal bindingi349 – 3491Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, Metal-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciFAES1166018-WGS:GSNK-689-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
ORF Names:FAES_0682Imported
OrganismiFibrella aestuarina BUZ 2Imported
Taxonomic identifieri1166018 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeFibrella
ProteomesiUP000011058: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotationSAAS annotations

Structurei

3D structure databases

ProteinModelPortaliI0K3J0.

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

I0K3J0-1 [UniParc]FASTAAdd to Basket

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MAQINLTLGD KAYFPFVEKP IAYEGRDSDN PLAFKFYNPA QTIMGMPMKD    50
LFRFAVAYWH TFCGTGADPF GPGVKHFPWD AGKDPLGAAF QKADAAFEFI 100
TKMGIEYYCF HDVDVAPEGD SNHDFESNFR KVVDYLKQKQ QASGVNLLWG 150
TANLFSHERY MNGASTNPDF HVLAHGAWQV KNAIDATIEL GGRGYTFWGG 200
REGYMSLLNT NMKREQEHLG RFLQVSRDYA RKQGFKGAFY IEPKPMEPTK 250
HQYDFDAATV VGFLNKYGLQ DDFELNLETN HATLANHTFA HELQVAVDNN 300
MLGSIDANRG DYQNGWDTDQ FPVDVYELTE AMLVILEAGG FKSGGVNFDA 350
KTRRNSTDLD DIFIAHIGGM DTFARAAIAA EAILTKSKYK QLRTDRYASY 400
DSGAGADFEA GKLTLEDLRQ YAIDNGEAKQ VSGKQELYEM IVNQYI 446
Length:446
Mass (Da):50,093
Last modified:June 13, 2012 - v1
Checksum:i51479EE2B97EF29C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE796683 Genomic DNA. Translation: CCG98693.1.
RefSeqiYP_007319286.1. NC_020054.1.

Genome annotation databases

EnsemblBacteriaiCCG98693; CCG98693; FAES_0682.
GeneIDi14416684.
KEGGifae:FAES_0682.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE796683 Genomic DNA. Translation: CCG98693.1 .
RefSeqi YP_007319286.1. NC_020054.1.

3D structure databases

ProteinModelPortali I0K3J0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCG98693 ; CCG98693 ; FAES_0682 .
GeneIDi 14416684.
KEGGi fae:FAES_0682.

Phylogenomic databases

KOi K01805.

Enzyme and pathway databases

BioCyci FAES1166018-WGS:GSNK-689-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome Sequence of Fibrella aestuarina BUZ 2T, a Filamentous Marine Bacterium."
    Filippini M., Qi W., Blom J., Goesmann A., Smits T.H., Bagheri H.C.
    J. Bacteriol. 194:3555-3555(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BUZ 2Imported.

Entry informationi

Entry nameiI0K3J0_9BACT
AccessioniPrimary (citable) accession number: I0K3J0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: September 3, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi