Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

I0K3J0

- I0K3J0_9BACT

UniProt

I0K3J0 - I0K3J0_9BACT

Protein

Xylose isomerase

Gene

xylA

Organism
Fibrella aestuarina BUZ 2
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (13 Jun 2012)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei111 – 1111UniRule annotation
    Active sitei114 – 1141UniRule annotation
    Metal bindingi242 – 2421Magnesium 1UniRule annotation
    Metal bindingi278 – 2781Magnesium 1UniRule annotation
    Metal bindingi278 – 2781Magnesium 2UniRule annotation
    Metal bindingi281 – 2811Magnesium 2UniRule annotation
    Metal bindingi306 – 3061Magnesium 1UniRule annotation
    Metal bindingi317 – 3171Magnesium 2UniRule annotation
    Metal bindingi319 – 3191Magnesium 2UniRule annotation
    Metal bindingi349 – 3491Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciFAES1166018-WGS:GSNK-689-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    ORF Names:FAES_0682Imported
    OrganismiFibrella aestuarina BUZ 2Imported
    Taxonomic identifieri1166018 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeFibrella
    ProteomesiUP000011058: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliI0K3J0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    I0K3J0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAQINLTLGD KAYFPFVEKP IAYEGRDSDN PLAFKFYNPA QTIMGMPMKD    50
    LFRFAVAYWH TFCGTGADPF GPGVKHFPWD AGKDPLGAAF QKADAAFEFI 100
    TKMGIEYYCF HDVDVAPEGD SNHDFESNFR KVVDYLKQKQ QASGVNLLWG 150
    TANLFSHERY MNGASTNPDF HVLAHGAWQV KNAIDATIEL GGRGYTFWGG 200
    REGYMSLLNT NMKREQEHLG RFLQVSRDYA RKQGFKGAFY IEPKPMEPTK 250
    HQYDFDAATV VGFLNKYGLQ DDFELNLETN HATLANHTFA HELQVAVDNN 300
    MLGSIDANRG DYQNGWDTDQ FPVDVYELTE AMLVILEAGG FKSGGVNFDA 350
    KTRRNSTDLD DIFIAHIGGM DTFARAAIAA EAILTKSKYK QLRTDRYASY 400
    DSGAGADFEA GKLTLEDLRQ YAIDNGEAKQ VSGKQELYEM IVNQYI 446
    Length:446
    Mass (Da):50,093
    Last modified:June 13, 2012 - v1
    Checksum:i51479EE2B97EF29C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE796683 Genomic DNA. Translation: CCG98693.1.
    RefSeqiYP_007319286.1. NC_020054.1.

    Genome annotation databases

    EnsemblBacteriaiCCG98693; CCG98693; FAES_0682.
    GeneIDi14416684.
    KEGGifae:FAES_0682.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE796683 Genomic DNA. Translation: CCG98693.1 .
    RefSeqi YP_007319286.1. NC_020054.1.

    3D structure databases

    ProteinModelPortali I0K3J0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCG98693 ; CCG98693 ; FAES_0682 .
    GeneIDi 14416684.
    KEGGi fae:FAES_0682.

    Phylogenomic databases

    KOi K01805.

    Enzyme and pathway databases

    BioCyci FAES1166018-WGS:GSNK-689-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome Sequence of Fibrella aestuarina BUZ 2T, a Filamentous Marine Bacterium."
      Filippini M., Qi W., Blom J., Goesmann A., Smits T.H., Bagheri H.C.
      J. Bacteriol. 194:3555-3555(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BUZ 2Imported.

    Entry informationi

    Entry nameiI0K3J0_9BACT
    AccessioniPrimary (citable) accession number: I0K3J0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2012
    Last sequence update: June 13, 2012
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3