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I0K3J0 (I0K3J0_9BACT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length446 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. RuleBase RU000609 HAMAP-Rule MF_00455 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. RuleBase RU000610 HAMAP-Rule MF_00455 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity RuleBase RU000610 HAMAP-Rule MF_00455 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1111 By similarity HAMAP-Rule MF_00455
Active site1141 By similarity HAMAP-Rule MF_00455
Metal binding2421Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2781Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2781Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2811Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3061Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3171Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3191Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3491Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
I0K3J0 [UniParc].

Last modified June 13, 2012. Version 1.
Checksum: 51479EE2B97EF29C

FASTA44650,093
        10         20         30         40         50         60 
MAQINLTLGD KAYFPFVEKP IAYEGRDSDN PLAFKFYNPA QTIMGMPMKD LFRFAVAYWH 

        70         80         90        100        110        120 
TFCGTGADPF GPGVKHFPWD AGKDPLGAAF QKADAAFEFI TKMGIEYYCF HDVDVAPEGD 

       130        140        150        160        170        180 
SNHDFESNFR KVVDYLKQKQ QASGVNLLWG TANLFSHERY MNGASTNPDF HVLAHGAWQV 

       190        200        210        220        230        240 
KNAIDATIEL GGRGYTFWGG REGYMSLLNT NMKREQEHLG RFLQVSRDYA RKQGFKGAFY 

       250        260        270        280        290        300 
IEPKPMEPTK HQYDFDAATV VGFLNKYGLQ DDFELNLETN HATLANHTFA HELQVAVDNN 

       310        320        330        340        350        360 
MLGSIDANRG DYQNGWDTDQ FPVDVYELTE AMLVILEAGG FKSGGVNFDA KTRRNSTDLD 

       370        380        390        400        410        420 
DIFIAHIGGM DTFARAAIAA EAILTKSKYK QLRTDRYASY DSGAGADFEA GKLTLEDLRQ 

       430        440 
YAIDNGEAKQ VSGKQELYEM IVNQYI 

« Hide

References

[1]"Genome Sequence of Fibrella aestuarina BUZ 2T, a Filamentous Marine Bacterium."
Filippini M., Qi W., Blom J., Goesmann A., Smits T.H., Bagheri H.C.
J. Bacteriol. 194:3555-3555(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BUZ 2 EMBL CCG98693.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE796683 Genomic DNA. Translation: CCG98693.1.
RefSeqYP_007319286.1. NC_020054.1.

3D structure databases

ProteinModelPortalI0K3J0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCG98693; CCG98693; FAES_0682.
GeneID14416684.
KEGGfae:FAES_0682.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.

Enzyme and pathway databases

BioCycFAES1166018-WGS:GSNK-689-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameI0K3J0_9BACT
AccessionPrimary (citable) accession number: I0K3J0
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: July 9, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)